Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 Y_RNA.297-201ENST00000364950 91 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 Y_RNA.542-201ENST00000384641 111 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 MIR1302-7-201ENST00000408841 72 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 RNU6-561P-201ENST00000516222 102 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 MIR4308-201ENST00000580634 81 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 MIR3668-201ENST00000582138 75 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 Z83818.1-201ENST00000603584 150 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 MIR411-201ENST00000362239 96 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USP35Q9P2H5 MTND5P15-201ENST00000434246 349 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 AL121914.1-201ENST00000450188 156 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 RN7SKP179-201ENST00000516126 217 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 SNORA18.4-201ENST00000516440 124 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 AC022559.1-201ENST00000520905 205 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 RNU2-4P-201ENST00000606190 192 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 AC008163.1-202ENST00000636004 2889 ntBASIC1.66□□□□□ -2.14
USP35Q9P2H5 SNORA27-201ENST00000384323 126 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 MIR200A-201ENST00000384875 90 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 RNU6-918P-201ENST00000391219 106 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 MRPL35P3-201ENST00000421557 364 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 AF228730.3-201ENST00000436691 102 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.65□□□□□ -2.15
USP35Q9P2H5 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
USP35Q9P2H5 Y_RNA.23-201ENST00000362496 106 ntBASIC1.64□□□□□ -2.15
USP35Q9P2H5 RNU6-1189P-201ENST00000383958 107 ntBASIC1.64□□□□□ -2.15
USP35Q9P2H5 RNU4-70P-201ENST00000384579 139 ntBASIC1.64□□□□□ -2.15
USP35Q9P2H5 RNU2-64P-201ENST00000411315 191 ntBASIC1.64□□□□□ -2.15
USP35Q9P2H5 RNU7-73P-201ENST00000458743 63 ntBASIC1.64□□□□□ -2.15
USP35Q9P2H5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.64□□□□□ -2.15
USP35Q9P2H5 RNU6-396P-201ENST00000365369 105 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 RNU6-613P-201ENST00000410412 108 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 RNU7-67P-201ENST00000459003 62 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 Y_RNA.644-201ENST00000459006 113 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 RPS29P24-201ENST00000486345 171 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 Y_RNA.674-201ENST00000516362 113 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 RNU7-53P-201ENST00000516705 60 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 SNORD36C-201ENST00000516733 66 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 SNORA81.3-201ENST00000517283 198 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 MIR548AO-201ENST00000579992 96 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 AL365205.2-201ENST00000594586 68 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 AC004792.1-201ENST00000614523 137 ntBASIC1.63□□□□□ -2.15
USP35Q9P2H5 RNU6-275P-201ENST00000364910 107 ntBASIC1.62□□□□□ -2.15
USP35Q9P2H5 RNU6-1292P-201ENST00000383856 107 ntBASIC1.62□□□□□ -2.15
USP35Q9P2H5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.62□□□□□ -2.15
USP35Q9P2H5 RNU7-96P-201ENST00000459535 64 ntBASIC1.62□□□□□ -2.15
USP35Q9P2H5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.62□□□□□ -2.15
USP35Q9P2H5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.62□□□□□ -2.15
USP35Q9P2H5 AL391516.1-201ENST00000554380 2449 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USP35Q9P2H5 Y_RNA.75-201ENST00000362927 97 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 Y_RNA.785-201ENST00000384290 109 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 MT-TN-201ENST00000387400 73 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 SNORD116-25-201ENST00000516517 92 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 MIR378D2-201ENST00000580636 98 ntBASIC1.61□□□□□ -2.15
USP35Q9P2H5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USP35Q9P2H5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.6□□□□□ -2.15
USP35Q9P2H5 POLR2J4-204ENST00000418424 324 ntBASIC1.6□□□□□ -2.15
USP35Q9P2H5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.6□□□□□ -2.15
USP35Q9P2H5 MIR4295-201ENST00000585286 85 ntBASIC1.6□□□□□ -2.15
USP35Q9P2H5 AC012676.2-201ENST00000619258 186 ntBASIC1.6□□□□□ -2.15
USP35Q9P2H5 MIR6516-201ENST00000630554 81 ntBASIC1.6□□□□□ -2.15
USP35Q9P2H5 Y_RNA.29-201ENST00000362570 113 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 RNU6-682P-201ENST00000363843 106 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 SNORD114-24-201ENST00000365029 72 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 Y_RNA.393-201ENST00000383936 102 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 SNORA1-201ENST00000384107 130 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 Y_RNA.440-201ENST00000384120 114 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 SNORD77.3-201ENST00000391113 65 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 Y_RNA.793-201ENST00000411222 111 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 AL138752.1-201ENST00000452964 351 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 AC087343.1-201ENST00000477341 475 ntBASIC1.59□□□□□ -2.15
USP35Q9P2H5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.59□□□□□ -2.16
USP35Q9P2H5 MIR377-201ENST00000362145 69 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 Y_RNA.150-201ENST00000363562 102 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 RNU6-643P-201ENST00000384018 107 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 AC074198.2-201ENST00000508153 258 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 RNU6-113P-201ENST00000516653 101 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 RNU6-861P-201ENST00000516745 106 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 MRPS18CP4-201ENST00000535821 231 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 AP002392.1-201ENST00000537692 208 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 HSPE1P19-201ENST00000603327 295 ntBASIC1.58□□□□□ -2.16
USP35Q9P2H5 RNU6-1020P-201ENST00000363684 107 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 RNU6-978P-201ENST00000364371 103 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 Y_RNA.233-201ENST00000364407 101 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 PCNPP3-201ENST00000393579 471 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 SNORD111-201ENST00000408139 94 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 AL035398.1-201ENST00000430869 322 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 RNU7-120P-201ENST00000459334 63 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 RNU6-998P-201ENST00000515894 101 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 RNU6-1219P-201ENST00000516143 112 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 Y_RNA.700-201ENST00000516806 100 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 RNU6-958P-201ENST00000516995 106 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 MIR5197-201ENST00000583721 112 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 AC131055.1-201ENST00000584626 316 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 AC106800.4-201ENST00000614905 153 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 FTX_2.1-201ENST00000618816 94 ntBASIC1.57□□□□□ -2.16
USP35Q9P2H5 MIR548I3-201ENST00000408378 149 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms