Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU6-580P-201ENST00000365159 107 ntBASIC0.85□□□□□ -2.27
Q9N2K0 Y_RNA.454-201ENST00000384224 113 ntBASIC0.85□□□□□ -2.27
Q9N2K0 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
Q9N2K0 SNORD38B-201ENST00000384690 67 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
Q9N2K0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
Q9N2K0 RNU6-561P-201ENST00000516222 102 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
Q9N2K0 Y_RNA.680-201ENST00000516441 93 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
Q9N2K0 RNU6-111P-201ENST00000517179 105 ntBASIC0.85□□□□□ -2.27
Q9N2K0 MIR378D2-201ENST00000580636 98 ntBASIC0.85□□□□□ -2.27
Q9N2K0 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
Q9N2K0 Z83818.1-201ENST00000603584 150 ntBASIC0.85□□□□□ -2.27
Q9N2K0 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
Q9N2K0 SNORD38B-202ENST00000625943 69 ntBASIC0.85□□□□□ -2.27
Q9N2K0 Z97988.1-201ENST00000637697 135 ntBASIC0.85□□□□□ -2.27
Q9N2K0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
Q9N2K0 Y_RNA.200-201ENST00000364018 102 ntBASIC0.84□□□□□ -2.27
Q9N2K0 RNU6-275P-201ENST00000364910 107 ntBASIC0.84□□□□□ -2.27
Q9N2K0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.84□□□□□ -2.27
Q9N2K0 Y_RNA.435-201ENST00000384095 112 ntBASIC0.84□□□□□ -2.27
Q9N2K0 RNA5SP261-201ENST00000410536 106 ntBASIC0.84□□□□□ -2.27
Q9N2K0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
Q9N2K0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.84□□□□□ -2.27
Q9N2K0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.84□□□□□ -2.27
Q9N2K0 MIR5197-201ENST00000583721 112 ntBASIC0.84□□□□□ -2.27
Q9N2K0 MIR8055-201ENST00000610739 97 ntBASIC0.84□□□□□ -2.27
Q9N2K0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Q9N2K0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Q9N2K0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Q9N2K0 Y_RNA.75-201ENST00000362927 97 ntBASIC0.83□□□□□ -2.28
Q9N2K0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
Q9N2K0 SNORA1.1-201ENST00000364671 133 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RNU6-923P-201ENST00000364753 107 ntBASIC0.83□□□□□ -2.28
Q9N2K0 Y_RNA.401-201ENST00000383965 117 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RNU6-643P-201ENST00000384018 107 ntBASIC0.83□□□□□ -2.28
Q9N2K0 SNORA1-201ENST00000384107 130 ntBASIC0.83□□□□□ -2.28
Q9N2K0 MIR518E-201ENST00000385252 88 ntBASIC0.83□□□□□ -2.28
Q9N2K0 MIR548I3-201ENST00000408378 149 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
Q9N2K0 RNU2-11P-201ENST00000459191 187 ntBASIC0.83□□□□□ -2.28
Q9N2K0 AC087343.1-201ENST00000477341 475 ntBASIC0.83□□□□□ -2.28
Q9N2K0 MIR4308-201ENST00000580634 81 ntBASIC0.83□□□□□ -2.28
Q9N2K0 MIR3129-201ENST00000581095 76 ntBASIC0.83□□□□□ -2.28
Q9N2K0 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
Q9N2K0 MIR302B-201ENST00000362188 73 ntBASIC0.82□□□□□ -2.28
Q9N2K0 MIR411-201ENST00000362239 96 ntBASIC0.82□□□□□ -2.28
Q9N2K0 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
Q9N2K0 RNU6-978P-201ENST00000364371 103 ntBASIC0.82□□□□□ -2.28
Q9N2K0 RNU6-574P-201ENST00000384265 107 ntBASIC0.82□□□□□ -2.28
Q9N2K0 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
Q9N2K0 RNU6-913P-201ENST00000390913 95 ntBASIC0.82□□□□□ -2.28
Q9N2K0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
Q9N2K0 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
Q9N2K0 AC009779.6-201ENST00000603972 165 ntBASIC0.82□□□□□ -2.28
Q9N2K0 Y_RNA.83-201ENST00000363005 113 ntBASIC0.81□□□□□ -2.28
Q9N2K0 Y_RNA.351-201ENST00000365436 96 ntBASIC0.81□□□□□ -2.28
Q9N2K0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
Q9N2K0 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
Q9N2K0 AL078603.1-201ENST00000603824 313 ntBASIC0.81□□□□□ -2.28
Q9N2K0 RNU6-94P-201ENST00000607728 107 ntBASIC0.81□□□□□ -2.28
Q9N2K0 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.81□□□□□ -2.28
Q9N2K0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Q9N2K0 MIR1-1-201ENST00000362147 71 ntBASIC0.8□□□□□ -2.28
Q9N2K0 RNU6-1020P-201ENST00000363684 107 ntBASIC0.8□□□□□ -2.28
Q9N2K0 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
Q9N2K0 MT-TG-201ENST00000387429 68 ntBASIC0.8□□□□□ -2.28
Q9N2K0 MIR1827-201ENST00000408549 66 ntBASIC0.8□□□□□ -2.28
Q9N2K0 RNA5SP95-201ENST00000410319 137 ntBASIC0.8□□□□□ -2.28
Q9N2K0 RNA5SP127-201ENST00000411051 133 ntBASIC0.8□□□□□ -2.28
Q9N2K0 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
Q9N2K0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.8□□□□□ -2.28
Q9N2K0 MRPS18CP4-201ENST00000535821 231 ntBASIC0.8□□□□□ -2.28
Q9N2K0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.8□□□□□ -2.28
Q9N2K0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Q9N2K0 MIR96-201ENST00000362288 78 ntBASIC0.79□□□□□ -2.28
Q9N2K0 Y_RNA.188-201ENST00000363952 111 ntBASIC0.79□□□□□ -2.28
Q9N2K0 SNORA25.7-201ENST00000364375 127 ntBASIC0.79□□□□□ -2.28
Q9N2K0 Y_RNA.515-201ENST00000384535 112 ntBASIC0.79□□□□□ -2.28
Q9N2K0 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
Q9N2K0 MIR624-201ENST00000385217 97 ntBASIC0.79□□□□□ -2.28
Q9N2K0 RNU6-205P-201ENST00000390858 107 ntBASIC0.79□□□□□ -2.28
Q9N2K0 RNU6-918P-201ENST00000391219 106 ntBASIC0.79□□□□□ -2.28
Q9N2K0 AL138752.1-201ENST00000452964 351 ntBASIC0.79□□□□□ -2.28
Q9N2K0 RNU7-62P-201ENST00000458856 62 ntBASIC0.79□□□□□ -2.28
Q9N2K0 snoU13.18-201ENST00000459483 104 ntBASIC0.79□□□□□ -2.28
Q9N2K0 RNU7-70P-201ENST00000516941 66 ntBASIC0.79□□□□□ -2.28
Q9N2K0 AC211469.2-201ENST00000605461 205 ntBASIC0.79□□□□□ -2.28
Q9N2K0 MIR6734-201ENST00000621166 68 ntBASIC0.79□□□□□ -2.28
Q9N2K0 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
Q9N2K0 AC244023.1-201ENST00000426884 112 ntBASIC0.78□□□□□ -2.28
Q9N2K0 AC113410.1-201ENST00000505029 247 ntBASIC0.78□□□□□ -2.28
Q9N2K0 MIR3152-201ENST00000579801 74 ntBASIC0.78□□□□□ -2.28
Q9N2K0 AC242498.1-201ENST00000604134 111 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 973.2 ms