Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU6-504P-201ENST00000516568 104 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.67□□□□□ -2.3
NANOGQ9H9S0 MIR3129-201ENST00000581095 76 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORA4-201ENST00000584302 138 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-40-201ENST00000606510 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
NANOGQ9H9S0 SNORA1.2-201ENST00000365189 134 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU6-1336P-201ENST00000383886 109 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 SNORA27-201ENST00000384323 126 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU6-578P-201ENST00000390980 103 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 SNORA40.5-201ENST00000391061 128 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU7-67P-201ENST00000459003 62 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 snoU13.18-201ENST00000459483 104 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU6-1023P-201ENST00000516137 106 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNA5SP153-201ENST00000516498 76 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNU6-197P-201ENST00000516680 100 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NANOGQ9H9S0 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 MIR4744-201ENST00000581563 82 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 MIR8055-201ENST00000610739 97 ntBASIC0.66□□□□□ -2.3
NANOGQ9H9S0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
NANOGQ9H9S0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
NANOGQ9H9S0 RNY1-201ENST00000364228 113 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 RNU6-978P-201ENST00000364371 103 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.508-201ENST00000384502 114 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 SNORA2B-201ENST00000384583 137 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 MIR942-201ENST00000401111 86 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 MIR1302-3-201ENST00000408128 138 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 RNU2-64P-201ENST00000411315 191 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC087499.4-201ENST00000448505 178 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.65□□□□□ -2.31
NANOGQ9H9S0 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC022559.1-201ENST00000520905 205 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 AC134878.1-201ENST00000619901 243 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
NANOGQ9H9S0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.242-201ENST00000364473 110 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 RNU6-597P-201ENST00000365620 102 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.412-201ENST00000384001 104 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 RNU4-43P-201ENST00000410628 137 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 AL121914.1-201ENST00000450188 156 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 RPS29P24-201ENST00000486345 171 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.64□□□□□ -2.31
NANOGQ9H9S0 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 RNU11-2P-201ENST00000516898 142 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 AC130289.1-201ENST00000577321 73 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 U6.106-201ENST00000636360 105 ntBASIC0.64□□□□□ -2.31
NANOGQ9H9S0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
NANOGQ9H9S0 MIR342-201ENST00000362212 99 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.7-201ENST00000362352 102 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 SNORD113.3-201ENST00000364630 78 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.274-201ENST00000364714 101 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 RNU6-580P-201ENST00000365159 107 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.355-201ENST00000365462 98 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 SNORA26.6-201ENST00000391256 115 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 SNORD83.1-201ENST00000411362 77 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.63□□□□□ -2.31
NANOGQ9H9S0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
NANOGQ9H9S0 RNU7-73P-201ENST00000458743 63 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 RNU6-998P-201ENST00000515894 101 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 MIR2115-201ENST00000516657 100 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 MTND5P32-201ENST00000560711 1802 ntBASIC0.63□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 RNU6-103P-201ENST00000363686 107 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.182-201ENST00000363880 111 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 SNORA20.1-201ENST00000364790 130 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 RNU6-396P-201ENST00000365369 105 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 Y_RNA.478-201ENST00000384358 107 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 MIR200A-201ENST00000384875 90 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
NANOGQ9H9S0 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
NANOGQ9H9S0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.61□□□□□ -2.31
NANOGQ9H9S0 SNORD12C-201ENST00000386307 89 ntBASIC0.61□□□□□ -2.31
NANOGQ9H9S0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 307.5 ms