Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL022345.2-201ENST00000606307 135 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 AC134878.1-201ENST00000619901 243 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDT1Q9H211 Y_RNA.191-201ENST00000363972 113 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 Y_RNA.440-201ENST00000384120 114 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 SNORD28B-201ENST00000390993 75 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 MIR1276-201ENST00000408707 83 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 AL158147.1-201ENST00000443970 75 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 HMGN2P32-201ENST00000444648 269 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 RNU6-781P-201ENST00000516377 101 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 MIR5197-201ENST00000583721 112 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 U7.2-201ENST00000607576 63 ntBASIC1.52□□□□□ -2.17
CDT1Q9H211 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 SNORD116-14-201ENST00000383894 92 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 SNORD116-17-201ENST00000383929 92 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNU6-1189P-201ENST00000383958 107 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNU6-80P-201ENST00000384195 107 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 SNORD116-15-201ENST00000384445 92 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 SNORD116-19-201ENST00000384729 92 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNU2-51P-201ENST00000410708 197 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RPS26P48-201ENST00000491713 339 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNU6-917P-201ENST00000516294 104 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNU6-830P-201ENST00000516353 107 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 Y_RNA.692-201ENST00000516627 105 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 RNA5SP480-201ENST00000516840 109 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 AC019176.1-201ENST00000518519 225 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 AP003484.1-201ENST00000530974 250 ntBASIC1.51□□□□□ -2.17
CDT1Q9H211 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CDT1Q9H211 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 RNA5SP205-201ENST00000364653 136 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 SNORA2.2-201ENST00000365473 135 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR570-201ENST00000384917 97 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR452-201ENST00000385020 85 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 RNU6-735P-201ENST00000410612 107 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 AC079140.2-201ENST00000506193 142 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 RNU6-479P-201ENST00000516348 105 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 RNU6-62P-201ENST00000516526 102 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR548AR-201ENST00000582191 57 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR6734-201ENST00000621166 68 ntBASIC1.5□□□□□ -2.17
CDT1Q9H211 MIR539-201ENST00000365690 78 ntBASIC1.49□□□□□ -2.17
CDT1Q9H211 SNORA40.5-201ENST00000391061 128 ntBASIC1.49□□□□□ -2.17
CDT1Q9H211 U8.17-201ENST00000391292 132 ntBASIC1.49□□□□□ -2.17
CDT1Q9H211 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.49□□□□□ -2.17
CDT1Q9H211 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
CDT1Q9H211 FAM106DP-201ENST00000586416 501 ntBASIC1.49□□□□□ -2.17
CDT1Q9H211 Y_RNA.410-201ENST00000383992 113 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 SNORD38C-201ENST00000384381 69 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 RNU1-78P-201ENST00000391248 165 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
CDT1Q9H211 Y_RNA.617-201ENST00000410920 90 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 RNU6-313P-201ENST00000516317 112 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 SNORA18.7-201ENST00000516910 131 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.48□□□□□ -2.17
CDT1Q9H211 MIR4452-201ENST00000583004 71 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 AL391516.1-201ENST00000554380 2449 ntBASIC1.48□□□□□ -2.17
CDT1Q9H211 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDT1Q9H211 MIR342-201ENST00000362212 99 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 Y_RNA.242-201ENST00000364473 110 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 Y_RNA.351-201ENST00000365436 96 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 SNORD18B-201ENST00000365659 72 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 MIR136-201ENST00000385207 82 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 AC008267.6-201ENST00000441664 139 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 RNU7-45P-201ENST00000459460 63 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 RN7SKP19-201ENST00000516016 252 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 AC090049.2-201ENST00000550377 109 ntBASIC1.47□□□□□ -2.17
CDT1Q9H211 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDT1Q9H211 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
CDT1Q9H211 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDT1Q9H211 RNU6-349P-201ENST00000362402 107 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 Y_RNA.241-201ENST00000364470 117 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 Y_RNA.366-201ENST00000365540 102 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 Y_RNA.540-201ENST00000384638 111 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 SNX2P2-201ENST00000424553 323 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 AC087499.4-201ENST00000448505 178 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 RPS29P29-201ENST00000456396 171 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 SNORD123-201ENST00000459473 70 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 RNU6-772P-201ENST00000516042 105 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.46□□□□□ -2.18
CDT1Q9H211 Y_RNA.757-201ENST00000578934 114 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 MIR548AI-201ENST00000579940 88 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 MIR3937-201ENST00000580135 106 ntBASIC1.46□□□□□ -2.18
CDT1Q9H211 SNORD33-201ENST00000362761 85 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 SNORA27-201ENST00000384323 126 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 RNU6-1081P-201ENST00000384537 107 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 MT-TI-201ENST00000387365 69 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 RNU2-13P-201ENST00000515909 113 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 RNU6-240P-201ENST00000516098 97 ntBASIC1.45□□□□□ -2.18
CDT1Q9H211 RNU6-1061P-201ENST00000516530 99 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms