Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 MIR548AO-201ENST00000579992 96 ntBASIC1.31□□□□□ -2.2
HMGB4Q8WW32 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 snoU13.16-201ENST00000459350 104 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 RNU7-96P-201ENST00000459535 64 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 RNU6-998P-201ENST00000515894 101 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 RNU6-958P-201ENST00000516995 106 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGB4Q8WW32 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
HMGB4Q8WW32 SNORA80D-201ENST00000384488 135 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 AL035398.1-201ENST00000430869 322 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 RNU7-73P-201ENST00000458743 63 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 MIR6734-201ENST00000621166 68 ntBASIC1.29□□□□□ -2.2
HMGB4Q8WW32 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU6-1336P-201ENST00000383886 109 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HMGB4Q8WW32 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 PCNPP3-201ENST00000393579 471 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU6-1135P-201ENST00000411083 103 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU7-53P-201ENST00000516705 60 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 AC098479.1-201ENST00000609225 154 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 AC027335.2-201ENST00000624030 375 ntBASIC1.28□□□□□ -2.2
HMGB4Q8WW32 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.272-201ENST00000364696 102 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 RNU6-913P-201ENST00000390913 95 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 RNU7-21P-201ENST00000459430 62 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 RNA5SP220-201ENST00000516298 104 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 MIR3646-201ENST00000578301 84 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 MIR3668-201ENST00000582138 75 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
HMGB4Q8WW32 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.150-201ENST00000363562 102 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 RNU6-1082P-201ENST00000364574 107 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.270-201ENST00000364693 104 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.351-201ENST00000365436 96 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 RNU6-886P-201ENST00000384319 105 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 RNU2-11P-201ENST00000459191 187 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 RNU7-80P-201ENST00000459562 61 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 SCARNA15-202ENST00000516881 127 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.26□□□□□ -2.21
HMGB4Q8WW32 SEPT14P17-201ENST00000617978 177 ntBASIC1.26□□□□□ -2.21
HMGB4Q8WW32 MIR222-201ENST00000384992 110 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 RNU6-907P-201ENST00000390924 102 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 SNORA75.5-201ENST00000391291 81 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 DNAJC19P2-201ENST00000593340 302 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 MIR8055-201ENST00000610739 97 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 MIR3658-201ENST00000636291 56 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 MIR6844-201ENST00000637122 62 ntBASIC1.25□□□□□ -2.21
HMGB4Q8WW32 MIR342-201ENST00000362212 99 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.555-201ENST00000384673 110 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 RNU6-394P-201ENST00000410735 107 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
HMGB4Q8WW32 RNU6-1149P-201ENST00000516810 97 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
HMGB4Q8WW32 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMGB4Q8WW32 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 RNU6-396P-201ENST00000365369 105 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.454-201ENST00000384224 113 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 MIR548I3-201ENST00000408378 149 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.23□□□□□ -2.21
HMGB4Q8WW32 MIR2115-201ENST00000516657 100 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 AC091932.4-201ENST00000623386 200 ntBASIC1.23□□□□□ -2.21
HMGB4Q8WW32 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
HMGB4Q8WW32 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB4Q8WW32 MTND5P32-201ENST00000560711 1802 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 Y_RNA.52-201ENST00000362760 96 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 RNU6-818P-201ENST00000364837 108 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 MIR19B1-201ENST00000384829 87 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 RNU6-588P-201ENST00000410281 105 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 RNU6-613P-201ENST00000410412 108 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 AC063976.4-201ENST00000421971 163 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 AC090844.1-201ENST00000422019 156 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 AC131055.1-201ENST00000584626 316 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 AC104465.1-201ENST00000611365 139 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 Z97988.1-201ENST00000637697 135 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
HMGB4Q8WW32 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
HMGB4Q8WW32 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
HMGB4Q8WW32 MIR302B-201ENST00000362188 73 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 RNU6-654P-201ENST00000364373 107 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
HMGB4Q8WW32 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms