Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
LRRTM1Q86UE6 AP001340.1-201ENST00000624405 217 ntBASIC1.09□□□□□ -2.23
LRRTM1Q86UE6 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.71-201ENST00000362892 104 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 SNORA25.3-201ENST00000363205 127 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.120-201ENST00000363304 110 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 SNORD26-201ENST00000384147 75 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 RNU6-958P-201ENST00000516995 106 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 RNU6-789P-201ENST00000517105 102 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 MIR4791-201ENST00000607666 84 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 AC008133.2-201ENST00000624540 351 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.08□□□□□ -2.24
LRRTM1Q86UE6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.114-201ENST00000363265 113 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RNU4-16P-201ENST00000364737 141 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 SNORA27-201ENST00000384323 126 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 MIR1302-7-201ENST00000408841 72 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.630-201ENST00000411370 108 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 AC087499.4-201ENST00000448505 178 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RPL30P7-201ENST00000479312 323 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RNU7-43P-201ENST00000516554 64 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 MIR3124-201ENST00000582636 67 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 7SK.8-201ENST00000612110 250 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 7SK.11-201ENST00000615477 250 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 7SK.13-201ENST00000622040 250 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
LRRTM1Q86UE6 AL596211.1-201ENST00000569873 2277 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-34-201ENST00000362441 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-12-201ENST00000362583 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-29-201ENST00000362834 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-9-201ENST00000362912 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-21-201ENST00000362963 81 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-14-201ENST00000363090 81 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-13-201ENST00000363358 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-41-201ENST00000363608 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-11-201ENST00000363616 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-5-201ENST00000363633 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-39-201ENST00000363694 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-4-201ENST00000363810 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-16-201ENST00000363887 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-6-201ENST00000363942 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-42-201ENST00000364273 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-15-201ENST00000364809 81 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-1-201ENST00000364961 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-26-201ENST00000365067 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-10-201ENST00000365073 81 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-43-201ENST00000365503 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-36-201ENST00000365629 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORA40.5-201ENST00000391061 128 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 AL603914.1-201ENST00000401964 204 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 HMGN1P33-201ENST00000432945 451 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 RNU2-11P-201ENST00000459191 187 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 RNU6-240P-201ENST00000516098 97 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 RNU6-781P-201ENST00000516377 101 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 MIR548AO-201ENST00000579992 96 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 MIR4303-201ENST00000581299 66 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 SNORD115-40-201ENST00000606510 82 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 AL512598.1-201ENST00000610158 273 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 AC243994.1-201ENST00000618627 109 ntBASIC1.06□□□□□ -2.24
LRRTM1Q86UE6 RNU6-349P-201ENST00000362402 107 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 SNORD113-1-201ENST00000365321 69 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 SNORD18B-201ENST00000365659 72 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 SNORA24-201ENST00000384096 131 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 AC090844.1-201ENST00000422019 156 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 AC009474.2-201ENST00000451383 136 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 RPS29P24-201ENST00000486345 171 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 RNA5SP458-201ENST00000516188 119 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 AP000942.3-201ENST00000603702 160 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 AL357312.1-201ENST00000603879 298 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 U7.2-201ENST00000607576 63 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 ZNF209P-201ENST00000593450 2304 ntBASIC1.05□□□□□ -2.24
LRRTM1Q86UE6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 RNA5SP327-201ENST00000362494 101 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 RNU6-22P-201ENST00000384355 107 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 MIR1185-1-201ENST00000408598 86 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 AC108667.1-201ENST00000428618 249 ntBASIC1.04□□□□□ -2.24
LRRTM1Q86UE6 AL158147.1-201ENST00000443970 75 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 253.5 ms