Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 AC007318.2-201ENST00000620999 243 ntBASIC3.25□□□□□ -1.89
NFX1Q12986 CTSLP2-204ENST00000629029 392 ntBASIC3.25□□□□□ -1.89
NFX1Q12986 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NFX1Q12986 HSBP1P2-201ENST00000299671 229 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 MIR340-201ENST00000362125 95 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 RNU6-936P-201ENST00000384005 107 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 RNA5SP482-201ENST00000391269 118 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 RNU2-48P-201ENST00000410694 191 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 AC245047.7-201ENST00000440265 293 ntBASIC3.24□□□□□ -1.89
NFX1Q12986 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NFX1Q12986 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
NFX1Q12986 SNORA25B-201ENST00000365507 128 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 RNU6-154P-201ENST00000384306 106 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 SNORD45A-201ENST00000384512 84 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
NFX1Q12986 RNU7-67P-201ENST00000459003 62 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 AC018868.1-201ENST00000491307 315 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 RN7SKP132-201ENST00000516001 208 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 RNU7-137P-201ENST00000516788 62 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 AL020996.3-201ENST00000606617 222 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 MIR338-201ENST00000636369 67 ntBASIC3.23□□□□□ -1.89
NFX1Q12986 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NFX1Q12986 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NFX1Q12986 RNU6-851P-201ENST00000384565 107 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 RNA5SP323-201ENST00000391094 133 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 RNU6-1086P-201ENST00000410930 100 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 AC105272.1-201ENST00000438604 198 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 RNU6-1041P-201ENST00000516254 102 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 RNU6-881P-201ENST00000516813 102 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 MIR4672-201ENST00000583126 81 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 MIR4536-1-201ENST00000583537 88 ntBASIC3.22□□□□□ -1.89
NFX1Q12986 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NFX1Q12986 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.89
NFX1Q12986 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NFX1Q12986 MIR337-201ENST00000362281 93 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 SNORA1.2-201ENST00000365189 134 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 SNORA8-201ENST00000384574 139 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 MIR592-201ENST00000384959 97 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 MIR1262-201ENST00000408276 93 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 RNU7-79P-201ENST00000516082 62 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 AC107016.2-201ENST00000547968 190 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 AC104996.3-201ENST00000590718 94 ntBASIC3.21□□□□□ -1.9
NFX1Q12986 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NFX1Q12986 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NFX1Q12986 RNU6-1079P-201ENST00000362861 110 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 SNORD116-24-201ENST00000384549 92 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 RPS29P29-201ENST00000456396 171 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 AL691482.2-201ENST00000457453 84 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 AC023790.1-201ENST00000482174 347 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 MIR3064-201ENST00000581130 66 ntBASIC3.2□□□□□ -1.9
NFX1Q12986 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
NFX1Q12986 RNU6-1216P-201ENST00000362590 107 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 Y_RNA.370-201ENST00000365589 108 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 Y_RNA.491-201ENST00000384417 107 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 RNU4-83P-201ENST00000410863 133 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.19□□□□□ -1.9
NFX1Q12986 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 AC015922.2-201ENST00000435593 184 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 MIR4319-201ENST00000577285 85 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 MIR8053-201ENST00000613344 75 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
NFX1Q12986 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.19□□□□□ -1.9
NFX1Q12986 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFX1Q12986 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NFX1Q12986 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFX1Q12986 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
NFX1Q12986 SNORA9.2-201ENST00000365361 133 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU6-132P-201ENST00000383863 107 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 SNORA24-201ENST00000384096 131 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU6-163P-201ENST00000384396 106 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU6-913P-201ENST00000390913 95 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 HSPE1P24-201ENST00000450782 238 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU7-73P-201ENST00000458743 63 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 RNU7-28P-201ENST00000516759 62 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 AP000753.3-201ENST00000604083 169 ntBASIC3.18□□□□□ -1.9
NFX1Q12986 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NFX1Q12986 MIR449A-201ENST00000362113 91 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 SNORA72.6-201ENST00000384520 129 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNU6-291P-201ENST00000384720 107 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 MIR548U-201ENST00000390728 81 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNU2-7P-201ENST00000410794 178 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNU7-26P-201ENST00000458980 63 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RN7SL429P-201ENST00000479090 223 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RN7SL489P-201ENST00000486185 223 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RN7SL327P-201ENST00000488659 223 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RN7SL633P-201ENST00000488974 297 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RPS29P11-201ENST00000496507 171 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNU6-1057P-201ENST00000517162 102 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 RN7SL853P-201ENST00000617250 223 ntBASIC3.17□□□□□ -1.9
NFX1Q12986 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.17□□□□□ -1.9
NFX1Q12986 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
NFX1Q12986 SNORA40.6-201ENST00000391153 128 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms