Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC6A11P48066 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
SLC6A11P48066 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLC6A11P48066 RNU6-1123P-201ENST00000362347 106 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 RNU6-1298P-201ENST00000362456 101 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 SNORA51.5-201ENST00000384126 131 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 RNU7-113P-201ENST00000459273 62 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 SNORA74.3-201ENST00000517108 154 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 MIR3152-201ENST00000579801 74 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
SLC6A11P48066 SNORA22.1-201ENST00000362701 134 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 Y_RNA.171-201ENST00000363760 102 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 U8.6-201ENST00000364939 135 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 SNORA51.10-201ENST00000384418 136 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 Y_RNA.531-201ENST00000384589 121 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 POLR2J4-204ENST00000418424 324 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 AC068339.1-201ENST00000526965 141 ntBASIC2.06□□□□□ -2.08
SLC6A11P48066 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SLC6A11P48066 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SLC6A11P48066 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
SLC6A11P48066 Y_RNA.309-201ENST00000365046 111 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNA5SP259-201ENST00000365541 109 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-439P-201ENST00000384188 106 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-1319P-201ENST00000390855 104 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-913P-201ENST00000390913 95 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-747P-201ENST00000390928 104 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-241P-201ENST00000391148 104 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNA5SP261-201ENST00000410536 106 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-177P-201ENST00000411257 104 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU2-13P-201ENST00000515909 113 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 Y_RNA.677-201ENST00000516401 85 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 DNAJC19P9-201ENST00000555084 351 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
SLC6A11P48066 RNU6-766P-201ENST00000362478 107 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 Y_RNA.323-201ENST00000365157 109 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 SNORA24-201ENST00000384096 131 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 Y_RNA.537-201ENST00000384626 109 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 MIR17-201ENST00000385012 84 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 HMGN1P33-201ENST00000432945 451 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 RPL39P25-201ENST00000449384 154 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 RNU7-73P-201ENST00000458743 63 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 RNU6-893P-201ENST00000458841 100 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 RPS23P4-201ENST00000487908 423 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 MIR5009-201ENST00000578736 100 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.04□□□□□ -2.08
SLC6A11P48066 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
SLC6A11P48066 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SLC6A11P48066 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SLC6A11P48066 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 Y_RNA.328-201ENST00000365208 113 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 RNU6-816P-201ENST00000390914 107 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 RNU6-1268P-201ENST00000391214 107 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 RNU6-1239P-201ENST00000391310 107 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 RNU6-1258P-201ENST00000516911 111 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 AC141557.1-201ENST00000540982 400 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 AL020996.3-201ENST00000606617 222 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 MIR6717-201ENST00000622747 73 ntBASIC2.03□□□□□ -2.08
SLC6A11P48066 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SLC6A11P48066 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
SLC6A11P48066 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SLC6A11P48066 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
SLC6A11P48066 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 Y_RNA.4-201ENST00000362333 112 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 MIR520C-201ENST00000385005 87 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 MIR513A1-201ENST00000385138 129 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 SNORA26.6-201ENST00000391256 115 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 RNU7-43P-201ENST00000516554 64 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 RNA5SP33-201ENST00000516687 98 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 MIR4764-201ENST00000580680 88 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 RNU6-94P-201ENST00000607728 107 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 AC008133.2-201ENST00000624540 351 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 AL162726.3-218ENST00000636401 95 ntBASIC2.02□□□□□ -2.09
SLC6A11P48066 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SLC6A11P48066 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 Y_RNA.43-201ENST00000362670 111 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 RNU1-17P-201ENST00000363022 152 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 Y_RNA.164-201ENST00000363709 102 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 Y_RNA.470-201ENST00000384307 117 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 RNU6-1113P-201ENST00000384348 107 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 RNA5SP212-201ENST00000391223 107 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 AC113410.1-201ENST00000505029 247 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 AC108729.3-201ENST00000513484 108 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.01□□□□□ -2.09
SLC6A11P48066 AC087741.2-201ENST00000619415 172 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 MIR6841-201ENST00000637129 72 ntBASIC2.01□□□□□ -2.09
SLC6A11P48066 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SLC6A11P48066 RNU6-1255P-201ENST00000363434 112 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms