Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 RNU6-187P-201ENST00000384139 106 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 SNORA26.6-201ENST00000391256 115 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.22□□□□□ -2.44
RFC3P40938 RPL39P25-201ENST00000449384 154 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 RNU7-152P-201ENST00000458982 64 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 MTCO2P24-201ENST00000515611 426 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 MIR5692C2-201ENST00000577959 77 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 SNORD58B-201ENST00000607313 66 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 MIR6082-201ENST00000613604 109 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 AL662814.1-201ENST00000617364 121 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 AC104985.2-201ENST00000620598 500 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 MIR1295B-201ENST00000636144 60 ntBASIC-0.22□□□□□ -2.44
RFC3P40938 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNA5SP128-201ENST00000365305 116 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 MIR760-201ENST00000390220 80 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNA5SP261-201ENST00000410536 106 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6-130P-201ENST00000411112 103 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6-277P-201ENST00000516272 106 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6-765P-201ENST00000516916 99 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 AP003733.2-201ENST00000529409 171 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 PART1_1.1-201ENST00000611761 217 ntBASIC-0.23□□□□□ -2.45
RFC3P40938 RNU6-653P-201ENST00000363074 106 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 RNU6-403P-201ENST00000363163 104 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 SNORD28-201ENST00000384706 75 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 RNA5SP237-201ENST00000410414 113 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 AF228730.3-201ENST00000436691 102 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 MRPS35P2-201ENST00000508242 191 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 RNU6-504P-201ENST00000516568 104 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 MIR4639-201ENST00000584938 69 ntBASIC-0.24□□□□□ -2.45
RFC3P40938 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
RFC3P40938 SNORD113-8-201ENST00000363497 74 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 MIR214-201ENST00000385214 110 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 U8.15-201ENST00000390947 134 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 RNU6-397P-201ENST00000516226 104 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 MIR4636-201ENST00000582271 80 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 AC084781.2-201ENST00000615568 161 ntBASIC-0.25□□□□□ -2.45
RFC3P40938 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 RNU4-40P-201ENST00000364351 143 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 MIR892B-201ENST00000401279 77 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 AC098614.3-201ENST00000438957 440 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 HSPE1P25-201ENST00000455484 251 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 MIR5688-201ENST00000580619 83 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 MIR499B-201ENST00000636498 73 ntBASIC-0.26□□□□□ -2.45
RFC3P40938 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 RNU6-102P-201ENST00000384485 104 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 RNU6-35P-201ENST00000384530 107 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 MIR526A2-201ENST00000390198 65 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 RNU6-782P-201ENST00000516852 104 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 AC040926.1-201ENST00000530195 238 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 MIR4491-201ENST00000581087 68 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.27□□□□□ -2.45
RFC3P40938 MIR302B-201ENST00000362188 73 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 SNORA2A-201ENST00000383885 135 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 RNU6-291P-201ENST00000384720 107 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 SNORA26-201ENST00000391286 122 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 MIR548H2-201ENST00000408874 88 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 RPL39P34-201ENST00000477141 156 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 RNU6-976P-201ENST00000516086 111 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 MIR5589-201ENST00000579442 60 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.28□□□□□ -2.45
RFC3P40938 MIR1302-1-201ENST00000637932 143 ntBASIC-0.28□□□□□ -2.45
RFC3P40938 MIR342-201ENST00000362212 99 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 RNU4-90P-201ENST00000362773 141 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 MIR215-201ENST00000384858 110 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 AC096949.1-201ENST00000412047 152 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 AC104692.1-201ENST00000472406 90 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 RNU6-475P-201ENST00000516073 104 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.29□□□□□ -2.46
RFC3P40938 AC141846.1-201ENST00000568348 142 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 U6atac.1-201ENST00000616025 117 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 MIR376A1-201ENST00000616574 68 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms