Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AC010332.2-201ENST00000613083 1904 ntBASIC1.32□□□□□ -2.2
NR1D1P20393 Y_RNA.37-201ENST00000362606 108 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 SNORA1.2-201ENST00000365189 134 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 Y_RNA.420-201ENST00000384043 110 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 MIR526A1-201ENST00000384897 85 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 AL451046.2-201ENST00000403074 277 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.31□□□□□ -2.2
NR1D1P20393 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 HMGN1P33-201ENST00000432945 451 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 AF228730.3-201ENST00000436691 102 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 RNU4-57P-201ENST00000515980 135 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 AC015726.2-201ENST00000620112 122 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 AP001340.1-201ENST00000624405 217 ntBASIC1.31□□□□□ -2.2
NR1D1P20393 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NR1D1P20393 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NR1D1P20393 SNORD113-1-201ENST00000365321 69 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 RNU6-81P-201ENST00000365608 104 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 RNU6-1067P-201ENST00000384752 107 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 Y_RNA.584-201ENST00000391090 114 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 Y_RNA.586-201ENST00000391146 98 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 RNU6-257P-201ENST00000410238 98 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.3□□□□□ -2.2
NR1D1P20393 RNA5SP272-201ENST00000516095 111 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 RNU6-917P-201ENST00000516294 104 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.3□□□□□ -2.2
NR1D1P20393 AC132825.6-201ENST00000638861 357 ntBASIC1.3□□□□□ -2.2
NR1D1P20393 Y_RNA.30-201ENST00000362572 97 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 Y_RNA.52-201ENST00000362760 96 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 SNORA40-201ENST00000388090 126 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 RNU6-460P-201ENST00000391158 108 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 U8.17-201ENST00000391292 132 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 RNU6-938P-201ENST00000411285 103 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 MTND4LP9-201ENST00000427694 174 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 RNU7-43P-201ENST00000516554 64 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
NR1D1P20393 MIR376A2-201ENST00000636782 80 ntBASIC1.29□□□□□ -2.2
NR1D1P20393 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NR1D1P20393 Y_RNA.120-201ENST00000363304 110 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 RNU6-1189P-201ENST00000383958 107 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 SNORA20-201ENST00000384662 132 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 SCARNA15-202ENST00000516881 127 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 RNU2-60P-201ENST00000517290 128 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 AP001328.1-201ENST00000528550 176 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 MIR151B-201ENST00000584249 96 ntBASIC1.28□□□□□ -2.2
NR1D1P20393 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
NR1D1P20393 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.21
NR1D1P20393 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NR1D1P20393 AL157777.2-201ENST00000258070 137 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 RNU6-915P-201ENST00000364943 103 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 SNORA40.5-201ENST00000391061 128 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
NR1D1P20393 SNORD123-201ENST00000459473 70 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 AC107297.1-201ENST00000459991 176 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 RNA5SP236-201ENST00000516169 116 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 SNORD36C-201ENST00000516733 66 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 AP003484.1-201ENST00000530974 250 ntBASIC1.27□□□□□ -2.21
NR1D1P20393 MTND5P32-201ENST00000560711 1802 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-34-201ENST00000362441 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-12-201ENST00000362583 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-29-201ENST00000362834 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-9-201ENST00000362912 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-21-201ENST00000362963 81 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-14-201ENST00000363090 81 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-13-201ENST00000363358 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-41-201ENST00000363608 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-11-201ENST00000363616 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-5-201ENST00000363633 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-39-201ENST00000363694 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-4-201ENST00000363810 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-16-201ENST00000363887 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-6-201ENST00000363942 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-42-201ENST00000364273 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-15-201ENST00000364809 81 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-1-201ENST00000364961 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-26-201ENST00000365067 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-10-201ENST00000365073 81 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-43-201ENST00000365503 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-36-201ENST00000365629 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 Y_RNA.440-201ENST00000384120 114 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 AL603914.1-201ENST00000401964 204 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORA18.7-201ENST00000516910 131 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 SNORD115-40-201ENST00000606510 82 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 U7.2-201ENST00000607576 63 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 TUG1_4.1-201ENST00000619464 181 ntBASIC1.26□□□□□ -2.21
NR1D1P20393 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
NR1D1P20393 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms