Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 RNU7-53P-201ENST00000516705 60 ntBASIC1.38□□□□□ -2.19
PEPDP12955 SNORD36C-201ENST00000516733 66 ntBASIC1.38□□□□□ -2.19
PEPDP12955 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
PEPDP12955 AC090821.2-201ENST00000523552 176 ntBASIC1.38□□□□□ -2.19
PEPDP12955 MIR3144-201ENST00000579460 79 ntBASIC1.38□□□□□ -2.19
PEPDP12955 MIR3129-201ENST00000581095 76 ntBASIC1.38□□□□□ -2.19
PEPDP12955 AC131055.1-201ENST00000584626 316 ntBASIC1.38□□□□□ -2.19
PEPDP12955 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
PEPDP12955 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
PEPDP12955 AP001485.1-201ENST00000604799 199 ntBASIC1.38□□□□□ -2.19
PEPDP12955 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
PEPDP12955 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
PEPDP12955 PVT1_3.1-201ENST00000620853 95 ntBASIC1.38□□□□□ -2.19
PEPDP12955 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
PEPDP12955 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.38□□□□□ -2.19
PEPDP12955 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PEPDP12955 Y_RNA.68-201ENST00000362881 102 ntBASIC1.37□□□□□ -2.19
PEPDP12955 RNU6-449P-201ENST00000383914 107 ntBASIC1.37□□□□□ -2.19
PEPDP12955 SNORA51.10-201ENST00000384418 136 ntBASIC1.37□□□□□ -2.19
PEPDP12955 SNORD12-201ENST00000391002 90 ntBASIC1.37□□□□□ -2.19
PEPDP12955 AL392103.1-201ENST00000447000 198 ntBASIC1.37□□□□□ -2.19
PEPDP12955 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
PEPDP12955 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
PEPDP12955 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
PEPDP12955 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
PEPDP12955 AC243994.1-201ENST00000618627 109 ntBASIC1.37□□□□□ -2.19
PEPDP12955 MIR8065-201ENST00000620577 100 ntBASIC1.37□□□□□ -2.19
PEPDP12955 MIR4251-201ENST00000635819 61 ntBASIC1.37□□□□□ -2.19
PEPDP12955 MIR6844-201ENST00000637122 62 ntBASIC1.37□□□□□ -2.19
PEPDP12955 Y_RNA.251-201ENST00000364551 99 ntBASIC1.36□□□□□ -2.19
PEPDP12955 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
PEPDP12955 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
PEPDP12955 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
PEPDP12955 RNU7-41P-201ENST00000515917 61 ntBASIC1.36□□□□□ -2.19
PEPDP12955 Y_RNA.778-201ENST00000620203 90 ntBASIC1.36□□□□□ -2.19
PEPDP12955 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
PEPDP12955 MIR376A2-201ENST00000636782 80 ntBASIC1.36□□□□□ -2.19
PEPDP12955 RNU6-818P-201ENST00000364837 108 ntBASIC1.35□□□□□ -2.19
PEPDP12955 Y_RNA.494-201ENST00000384432 111 ntBASIC1.35□□□□□ -2.19
PEPDP12955 AL035398.1-201ENST00000430869 322 ntBASIC1.35□□□□□ -2.19
PEPDP12955 RNA5SP102-201ENST00000516865 106 ntBASIC1.35□□□□□ -2.19
PEPDP12955 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
PEPDP12955 RNA5SP264-201ENST00000363115 107 ntBASIC1.34□□□□□ -2.19
PEPDP12955 RNU6-209P-201ENST00000384118 107 ntBASIC1.34□□□□□ -2.19
PEPDP12955 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
PEPDP12955 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
PEPDP12955 RNA5SP236-201ENST00000516169 116 ntBASIC1.34□□□□□ -2.19
PEPDP12955 MIR8055-201ENST00000610739 97 ntBASIC1.34□□□□□ -2.19
PEPDP12955 RNU6-1082P-201ENST00000364574 107 ntBASIC1.33□□□□□ -2.2
PEPDP12955 Y_RNA.430-201ENST00000384081 110 ntBASIC1.33□□□□□ -2.2
PEPDP12955 MT-TN-201ENST00000387400 73 ntBASIC1.33□□□□□ -2.2
PEPDP12955 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
PEPDP12955 RNA5SP261-201ENST00000410536 106 ntBASIC1.33□□□□□ -2.2
PEPDP12955 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
PEPDP12955 RNU7-197P-201ENST00000458836 62 ntBASIC1.33□□□□□ -2.2
PEPDP12955 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
PEPDP12955 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.33□□□□□ -2.2
PEPDP12955 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
PEPDP12955 RNU6-113P-201ENST00000516653 101 ntBASIC1.33□□□□□ -2.2
PEPDP12955 AC011603.4-201ENST00000611325 277 ntBASIC1.33□□□□□ -2.2
PEPDP12955 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
PEPDP12955 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
PEPDP12955 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PEPDP12955 Y_RNA.120-201ENST00000363304 110 ntBASIC1.32□□□□□ -2.2
PEPDP12955 SNORD114-22-201ENST00000365423 72 ntBASIC1.32□□□□□ -2.2
PEPDP12955 Y_RNA.400-201ENST00000383963 111 ntBASIC1.32□□□□□ -2.2
PEPDP12955 Y_RNA.497-201ENST00000384447 98 ntBASIC1.32□□□□□ -2.2
PEPDP12955 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.32□□□□□ -2.2
PEPDP12955 MTATP6P21-201ENST00000440681 189 ntBASIC1.32□□□□□ -2.2
PEPDP12955 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
PEPDP12955 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.32□□□□□ -2.2
PEPDP12955 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.32□□□□□ -2.2
PEPDP12955 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
PEPDP12955 MIR377-201ENST00000362145 69 ntBASIC1.31□□□□□ -2.2
PEPDP12955 Y_RNA.52-201ENST00000362760 96 ntBASIC1.31□□□□□ -2.2
PEPDP12955 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
PEPDP12955 Y_RNA.351-201ENST00000365436 96 ntBASIC1.31□□□□□ -2.2
PEPDP12955 RNU6-1062P-201ENST00000383908 107 ntBASIC1.31□□□□□ -2.2
PEPDP12955 Y_RNA.433-201ENST00000384089 102 ntBASIC1.31□□□□□ -2.2
PEPDP12955 RNU7-200P-201ENST00000516105 62 ntBASIC1.31□□□□□ -2.2
PEPDP12955 RNU6-1223P-201ENST00000517124 104 ntBASIC1.31□□□□□ -2.2
PEPDP12955 AC112693.2-201ENST00000556538 232 ntBASIC1.31□□□□□ -2.2
PEPDP12955 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
PEPDP12955 AP001340.1-201ENST00000624405 217 ntBASIC1.31□□□□□ -2.2
PEPDP12955 SNORA80D-201ENST00000384488 135 ntBASIC1.3□□□□□ -2.2
PEPDP12955 AL603914.1-201ENST00000401964 204 ntBASIC1.3□□□□□ -2.2
PEPDP12955 MIR1185-1-201ENST00000408598 86 ntBASIC1.3□□□□□ -2.2
PEPDP12955 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.3□□□□□ -2.2
PEPDP12955 RNU7-67P-201ENST00000459003 62 ntBASIC1.3□□□□□ -2.2
PEPDP12955 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
PEPDP12955 SNORD79.1-201ENST00000516069 84 ntBASIC1.3□□□□□ -2.2
PEPDP12955 RNU6-1149P-201ENST00000516810 97 ntBASIC1.3□□□□□ -2.2
PEPDP12955 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.3□□□□□ -2.2
PEPDP12955 AL020996.3-201ENST00000606617 222 ntBASIC1.3□□□□□ -2.2
PEPDP12955 AC091895.1-201ENST00000624494 256 ntBASIC1.3□□□□□ -2.2
PEPDP12955 RNU6-804P-201ENST00000384286 107 ntBASIC1.29□□□□□ -2.2
PEPDP12955 MT-TR-201ENST00000387439 65 ntBASIC1.29□□□□□ -2.2
PEPDP12955 RNU6-1319P-201ENST00000390855 104 ntBASIC1.29□□□□□ -2.2
PEPDP12955 RNU6-747P-201ENST00000390928 104 ntBASIC1.29□□□□□ -2.2
PEPDP12955 RNU6-241P-201ENST00000391148 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms