Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CHGAP10645 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHGAP10645 RPL39P39-201ENST00000455840 151 ntBASIC3.74□□□□□ -1.81
CHGAP10645 AP004217.1-201ENST00000480579 346 ntBASIC3.74□□□□□ -1.81
CHGAP10645 RNU7-35P-201ENST00000517174 62 ntBASIC3.74□□□□□ -1.81
CHGAP10645 Z97988.1-201ENST00000637697 135 ntBASIC3.74□□□□□ -1.81
CHGAP10645 RNU6-813P-201ENST00000384691 107 ntBASIC3.73□□□□□ -1.81
CHGAP10645 AL023284.1-201ENST00000403956 276 ntBASIC3.73□□□□□ -1.81
CHGAP10645 RNU4-53P-201ENST00000410828 140 ntBASIC3.73□□□□□ -1.81
CHGAP10645 RNA5SP247-201ENST00000411181 105 ntBASIC3.73□□□□□ -1.81
CHGAP10645 AC090844.1-201ENST00000422019 156 ntBASIC3.73□□□□□ -1.81
CHGAP10645 RNA5SP282-201ENST00000516355 108 ntBASIC3.73□□□□□ -1.81
CHGAP10645 MIR3605-201ENST00000583214 100 ntBASIC3.73□□□□□ -1.81
CHGAP10645 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CHGAP10645 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CHGAP10645 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.72□□□□□ -1.81
CHGAP10645 SNORD116-10-201ENST00000363791 102 ntBASIC3.72□□□□□ -1.81
CHGAP10645 MIR27B-201ENST00000385129 97 ntBASIC3.72□□□□□ -1.81
CHGAP10645 RNU6-360P-201ENST00000390944 104 ntBASIC3.72□□□□□ -1.81
CHGAP10645 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.72□□□□□ -1.81
CHGAP10645 AC092185.1-201ENST00000491371 97 ntBASIC3.72□□□□□ -1.81
CHGAP10645 MIR376B-201ENST00000614515 100 ntBASIC3.72□□□□□ -1.81
CHGAP10645 AC008133.2-201ENST00000624540 351 ntBASIC3.72□□□□□ -1.81
CHGAP10645 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CHGAP10645 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHGAP10645 SNORD38.1-201ENST00000363863 68 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNU1-138P-201ENST00000384093 164 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNU6-342P-201ENST00000384521 104 ntBASIC3.71□□□□□ -1.82
CHGAP10645 MIR206-201ENST00000384872 86 ntBASIC3.71□□□□□ -1.82
CHGAP10645 MIR764-201ENST00000390811 85 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNU6-402P-201ENST00000410678 103 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNA5SP100-201ENST00000410903 110 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNA5SP59-201ENST00000410922 110 ntBASIC3.71□□□□□ -1.82
CHGAP10645 AC011753.1-201ENST00000451001 220 ntBASIC3.71□□□□□ -1.82
CHGAP10645 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.71□□□□□ -1.82
CHGAP10645 RNA5SP380-201ENST00000517190 98 ntBASIC3.71□□□□□ -1.82
CHGAP10645 AC015712.3-201ENST00000559380 164 ntBASIC3.71□□□□□ -1.82
CHGAP10645 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.71□□□□□ -1.82
CHGAP10645 MIR8065-201ENST00000620577 100 ntBASIC3.71□□□□□ -1.82
CHGAP10645 U4.3-201ENST00000621047 82 ntBASIC3.71□□□□□ -1.82
CHGAP10645 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.71□□□□□ -1.82
CHGAP10645 AC093831.2-201ENST00000624393 3427 ntBASIC3.7□□□□□ -1.82
CHGAP10645 RNU6-1123P-201ENST00000362347 106 ntBASIC3.7□□□□□ -1.82
CHGAP10645 RNU6-1276P-201ENST00000365372 104 ntBASIC3.7□□□□□ -1.82
CHGAP10645 SNORD58A-201ENST00000383875 65 ntBASIC3.7□□□□□ -1.82
CHGAP10645 RNU6-1124P-201ENST00000384169 107 ntBASIC3.7□□□□□ -1.82
CHGAP10645 UBL5P1-201ENST00000507979 193 ntBASIC3.7□□□□□ -1.82
CHGAP10645 MIR4764-201ENST00000580680 88 ntBASIC3.7□□□□□ -1.82
CHGAP10645 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHGAP10645 AC005336.3-201ENST00000623833 2679 ntBASIC3.69□□□□□ -1.82
CHGAP10645 Y_RNA.140-201ENST00000363474 103 ntBASIC3.69□□□□□ -1.82
CHGAP10645 U8.15-201ENST00000390947 134 ntBASIC3.69□□□□□ -1.82
CHGAP10645 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.69□□□□□ -1.82
CHGAP10645 RNU6-826P-201ENST00000516827 104 ntBASIC3.69□□□□□ -1.82
CHGAP10645 RNU6-1006P-201ENST00000516998 103 ntBASIC3.69□□□□□ -1.82
CHGAP10645 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.69□□□□□ -1.82
CHGAP10645 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHGAP10645 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.69□□□□□ -1.82
CHGAP10645 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHGAP10645 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.68□□□□□ -1.82
CHGAP10645 RNU6-228P-201ENST00000362700 106 ntBASIC3.68□□□□□ -1.82
CHGAP10645 AL445685.2-201ENST00000422551 342 ntBASIC3.68□□□□□ -1.82
CHGAP10645 SNORA9.3-201ENST00000516383 129 ntBASIC3.68□□□□□ -1.82
CHGAP10645 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHGAP10645 Y_RNA.73-201ENST00000362910 113 ntBASIC3.67□□□□□ -1.82
CHGAP10645 RNU6-497P-201ENST00000365316 104 ntBASIC3.67□□□□□ -1.82
CHGAP10645 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.67□□□□□ -1.82
CHGAP10645 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.67□□□□□ -1.82
CHGAP10645 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.67□□□□□ -1.82
CHGAP10645 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.67□□□□□ -1.82
CHGAP10645 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHGAP10645 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CHGAP10645 Y_RNA.247-201ENST00000364500 92 ntBASIC3.66□□□□□ -1.82
CHGAP10645 MIR520C-201ENST00000385005 87 ntBASIC3.66□□□□□ -1.82
CHGAP10645 RNU6-602P-201ENST00000411155 105 ntBASIC3.66□□□□□ -1.82
CHGAP10645 RNA5SP492-201ENST00000411330 114 ntBASIC3.66□□□□□ -1.82
CHGAP10645 AL591806.2-201ENST00000433122 173 ntBASIC3.66□□□□□ -1.82
CHGAP10645 AC108210.2-201ENST00000503681 201 ntBASIC3.66□□□□□ -1.82
CHGAP10645 SNORA31.26-201ENST00000517250 137 ntBASIC3.66□□□□□ -1.82
CHGAP10645 CYP3A52P-201ENST00000563326 91 ntBASIC3.66□□□□□ -1.82
CHGAP10645 DEFB122-202ENST00000569013 197 ntBASIC3.66□□□□□ -1.82
CHGAP10645 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.66□□□□□ -1.82
CHGAP10645 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHGAP10645 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHGAP10645 RNU6-219P-201ENST00000364728 107 ntBASIC3.65□□□□□ -1.83
CHGAP10645 RNU6-1086P-201ENST00000410930 100 ntBASIC3.65□□□□□ -1.83
CHGAP10645 RNA5SP450-201ENST00000411206 102 ntBASIC3.65□□□□□ -1.83
CHGAP10645 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.65□□□□□ -1.83
CHGAP10645 RPS29P28-201ENST00000446439 141 ntBASIC3.65□□□□□ -1.83
CHGAP10645 RNU7-79P-201ENST00000516082 62 ntBASIC3.65□□□□□ -1.83
CHGAP10645 RNU6-917P-201ENST00000516294 104 ntBASIC3.65□□□□□ -1.83
CHGAP10645 SNORD14A-201ENST00000606526 91 ntBASIC3.65□□□□□ -1.83
CHGAP10645 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.65□□□□□ -1.83
CHGAP10645 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CHGAP10645 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.64□□□□□ -1.83
CHGAP10645 RNU6-482P-201ENST00000391068 107 ntBASIC3.64□□□□□ -1.83
CHGAP10645 AC234781.5-201ENST00000508429 271 ntBASIC3.64□□□□□ -1.83
CHGAP10645 SNORA31.17-201ENST00000516953 127 ntBASIC3.64□□□□□ -1.83
CHGAP10645 MIR4529-201ENST00000578110 78 ntBASIC3.64□□□□□ -1.83
CHGAP10645 MIR5588-201ENST00000581890 63 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms