Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MIR4791-201ENST00000607666 84 ntBASIC1.35□□□□□ -2.19
MMP3P08254 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
MMP3P08254 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
MMP3P08254 AC022709.1-201ENST00000615967 87 ntBASIC1.35□□□□□ -2.19
MMP3P08254 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
MMP3P08254 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
MMP3P08254 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.35□□□□□ -2.19
MMP3P08254 Y_RNA.52-201ENST00000362760 96 ntBASIC1.34□□□□□ -2.19
MMP3P08254 Y_RNA.464-201ENST00000384282 110 ntBASIC1.34□□□□□ -2.19
MMP3P08254 SNORA27-201ENST00000384323 126 ntBASIC1.34□□□□□ -2.19
MMP3P08254 MIR624-201ENST00000385217 97 ntBASIC1.34□□□□□ -2.19
MMP3P08254 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.34□□□□□ -2.19
MMP3P08254 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
MMP3P08254 SNORA25.12-201ENST00000516202 82 ntBASIC1.34□□□□□ -2.19
MMP3P08254 RNU6-1149P-201ENST00000516810 97 ntBASIC1.34□□□□□ -2.19
MMP3P08254 AL357312.1-201ENST00000603879 298 ntBASIC1.34□□□□□ -2.19
MMP3P08254 AC243994.1-201ENST00000618627 109 ntBASIC1.34□□□□□ -2.19
MMP3P08254 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.34□□□□□ -2.19
MMP3P08254 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-34-201ENST00000362441 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-12-201ENST00000362583 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-29-201ENST00000362834 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-9-201ENST00000362912 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-21-201ENST00000362963 81 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-14-201ENST00000363090 81 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-13-201ENST00000363358 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-41-201ENST00000363608 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-11-201ENST00000363616 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-5-201ENST00000363633 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-39-201ENST00000363694 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-4-201ENST00000363810 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-16-201ENST00000363887 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-6-201ENST00000363942 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-42-201ENST00000364273 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-15-201ENST00000364809 81 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-1-201ENST00000364961 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-26-201ENST00000365067 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-10-201ENST00000365073 81 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORA1.2-201ENST00000365189 134 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-43-201ENST00000365503 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-36-201ENST00000365629 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
MMP3P08254 Y_RNA.410-201ENST00000383992 113 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORA51.10-201ENST00000384418 136 ntBASIC1.33□□□□□ -2.2
MMP3P08254 Y_RNA.580-201ENST00000391004 95 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RPL39P39-201ENST00000455840 151 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RNU6-958P-201ENST00000516995 106 ntBASIC1.33□□□□□ -2.2
MMP3P08254 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.33□□□□□ -2.2
MMP3P08254 AC112693.2-201ENST00000556538 232 ntBASIC1.33□□□□□ -2.2
MMP3P08254 SNORD115-40-201ENST00000606510 82 ntBASIC1.33□□□□□ -2.2
MMP3P08254 MIR4251-201ENST00000635819 61 ntBASIC1.33□□□□□ -2.2
MMP3P08254 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
MMP3P08254 Y_RNA.497-201ENST00000384447 98 ntBASIC1.32□□□□□ -2.2
MMP3P08254 SNORA20-201ENST00000384662 132 ntBASIC1.32□□□□□ -2.2
MMP3P08254 SNORA40.5-201ENST00000391061 128 ntBASIC1.32□□□□□ -2.2
MMP3P08254 RNU6-460P-201ENST00000391158 108 ntBASIC1.32□□□□□ -2.2
MMP3P08254 RNU7-45P-201ENST00000459460 63 ntBASIC1.32□□□□□ -2.2
MMP3P08254 AC048334.1-201ENST00000477975 159 ntBASIC1.32□□□□□ -2.2
MMP3P08254 RPS29P24-201ENST00000486345 171 ntBASIC1.32□□□□□ -2.2
MMP3P08254 MIR6515-201ENST00000619843 57 ntBASIC1.32□□□□□ -2.2
MMP3P08254 MTND1P7-201ENST00000632801 297 ntBASIC1.32□□□□□ -2.2
MMP3P08254 AL596211.1-201ENST00000569873 2277 ntBASIC1.31□□□□□ -2.2
MMP3P08254 Y_RNA.351-201ENST00000365436 96 ntBASIC1.31□□□□□ -2.2
MMP3P08254 RNU6-1190P-201ENST00000410811 104 ntBASIC1.31□□□□□ -2.2
MMP3P08254 AC107297.1-201ENST00000459991 176 ntBASIC1.31□□□□□ -2.2
MMP3P08254 RNU2-13P-201ENST00000515909 113 ntBASIC1.31□□□□□ -2.2
MMP3P08254 RNU7-200P-201ENST00000516105 62 ntBASIC1.31□□□□□ -2.2
MMP3P08254 Y_RNA.686-201ENST00000516548 134 ntBASIC1.31□□□□□ -2.2
MMP3P08254 SCARNA15-202ENST00000516881 127 ntBASIC1.31□□□□□ -2.2
MMP3P08254 RNU6-1212P-201ENST00000517023 104 ntBASIC1.31□□□□□ -2.2
MMP3P08254 MIR3646-201ENST00000578301 84 ntBASIC1.31□□□□□ -2.2
MMP3P08254 MIR548AO-201ENST00000579992 96 ntBASIC1.31□□□□□ -2.2
MMP3P08254 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
MMP3P08254 RNU6-913P-201ENST00000390913 95 ntBASIC1.3□□□□□ -2.2
MMP3P08254 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
MMP3P08254 RNU6-998P-201ENST00000515894 101 ntBASIC1.3□□□□□ -2.2
MMP3P08254 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
MMP3P08254 RNU2-60P-201ENST00000517290 128 ntBASIC1.3□□□□□ -2.2
MMP3P08254 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.3□□□□□ -2.2
MMP3P08254 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
MMP3P08254 MIR6767-201ENST00000637302 66 ntBASIC1.3□□□□□ -2.2
MMP3P08254 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
MMP3P08254 Y_RNA.215-201ENST00000364204 112 ntBASIC1.29□□□□□ -2.2
MMP3P08254 RNU6-1062P-201ENST00000383908 107 ntBASIC1.29□□□□□ -2.2
MMP3P08254 Y_RNA.400-201ENST00000383963 111 ntBASIC1.29□□□□□ -2.2
MMP3P08254 Y_RNA.506-201ENST00000384494 102 ntBASIC1.29□□□□□ -2.2
MMP3P08254 HMGN1P33-201ENST00000432945 451 ntBASIC1.29□□□□□ -2.2
MMP3P08254 SNORA31.4-201ENST00000516049 129 ntBASIC1.29□□□□□ -2.2
MMP3P08254 RNU6-426P-201ENST00000516464 97 ntBASIC1.29□□□□□ -2.2
MMP3P08254 MIR151B-201ENST00000584249 96 ntBASIC1.29□□□□□ -2.2
MMP3P08254 AC131055.1-201ENST00000584626 316 ntBASIC1.29□□□□□ -2.2
MMP3P08254 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
MMP3P08254 AC091932.4-201ENST00000623386 200 ntBASIC1.29□□□□□ -2.2
MMP3P08254 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.29□□□□□ -2.2
MMP3P08254 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
MMP3P08254 Y_RNA.251-201ENST00000364551 99 ntBASIC1.28□□□□□ -2.2
MMP3P08254 RNU4-16P-201ENST00000364737 141 ntBASIC1.28□□□□□ -2.2
MMP3P08254 Y_RNA.354-201ENST00000365448 111 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms