Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU6-457P-201ENST00000363999 107 ntBASIC2.23□□□□□ -2.05
SYPP08247 SNORD115-17-201ENST00000364612 82 ntBASIC2.23□□□□□ -2.05
SYPP08247 RNU6-913P-201ENST00000390913 95 ntBASIC2.23□□□□□ -2.05
SYPP08247 RNU6-109P-201ENST00000516364 107 ntBASIC2.23□□□□□ -2.05
SYPP08247 SNORA40.13-201ENST00000516379 120 ntBASIC2.23□□□□□ -2.05
SYPP08247 RNU6-184P-201ENST00000516514 107 ntBASIC2.23□□□□□ -2.05
SYPP08247 MIR3152-201ENST00000579801 74 ntBASIC2.23□□□□□ -2.05
SYPP08247 MIR3618-201ENST00000580330 88 ntBASIC2.23□□□□□ -2.05
SYPP08247 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
SYPP08247 Y_RNA.818-201ENST00000618813 71 ntBASIC2.23□□□□□ -2.05
SYPP08247 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SYPP08247 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SYPP08247 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SYPP08247 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SYPP08247 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SYPP08247 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SYPP08247 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.22□□□□□ -2.05
SYPP08247 SNORA22.1-201ENST00000362701 134 ntBASIC2.22□□□□□ -2.05
SYPP08247 SNORD115-2-201ENST00000362842 82 ntBASIC2.22□□□□□ -2.05
SYPP08247 Y_RNA.299-201ENST00000364973 94 ntBASIC2.22□□□□□ -2.05
SYPP08247 SNORD115-20-201ENST00000365099 82 ntBASIC2.22□□□□□ -2.05
SYPP08247 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
SYPP08247 RNU6-360P-201ENST00000390944 104 ntBASIC2.22□□□□□ -2.05
SYPP08247 RNU6-1190P-201ENST00000410811 104 ntBASIC2.22□□□□□ -2.05
SYPP08247 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SYPP08247 RNU7-113P-201ENST00000459273 62 ntBASIC2.22□□□□□ -2.05
SYPP08247 AC113410.1-201ENST00000505029 247 ntBASIC2.22□□□□□ -2.05
SYPP08247 AC141557.1-201ENST00000540982 400 ntBASIC2.22□□□□□ -2.05
SYPP08247 DNAJC19P9-201ENST00000555084 351 ntBASIC2.22□□□□□ -2.05
SYPP08247 FAM106DP-201ENST00000586416 501 ntBASIC2.22□□□□□ -2.05
SYPP08247 AL020996.3-201ENST00000606617 222 ntBASIC2.22□□□□□ -2.05
SYPP08247 MIR4791-201ENST00000607666 84 ntBASIC2.22□□□□□ -2.05
SYPP08247 MIR6717-201ENST00000622747 73 ntBASIC2.22□□□□□ -2.05
SYPP08247 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SYPP08247 Y_RNA.430-201ENST00000384081 110 ntBASIC2.21□□□□□ -2.06
SYPP08247 Y_RNA.537-201ENST00000384626 109 ntBASIC2.21□□□□□ -2.06
SYPP08247 SNORA64-201ENST00000384674 134 ntBASIC2.21□□□□□ -2.06
SYPP08247 RNA5SP261-201ENST00000410536 106 ntBASIC2.21□□□□□ -2.06
SYPP08247 RNU4-69P-201ENST00000410677 143 ntBASIC2.21□□□□□ -2.06
SYPP08247 SNORA72.7-201ENST00000516349 94 ntBASIC2.21□□□□□ -2.06
SYPP08247 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.21□□□□□ -2.06
SYPP08247 SNORA74.3-201ENST00000517108 154 ntBASIC2.21□□□□□ -2.06
SYPP08247 AL513534.2-201ENST00000603836 250 ntBASIC2.21□□□□□ -2.06
SYPP08247 Y_RNA.773-201ENST00000607168 90 ntBASIC2.21□□□□□ -2.06
SYPP08247 AC245884.12-201ENST00000615364 59 ntBASIC2.21□□□□□ -2.06
SYPP08247 MIR1255B1-201ENST00000636325 63 ntBASIC2.21□□□□□ -2.06
SYPP08247 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SYPP08247 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SYPP08247 RNU6-1123P-201ENST00000362347 106 ntBASIC2.2□□□□□ -2.06
SYPP08247 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
SYPP08247 RPL23AP6-201ENST00000446637 472 ntBASIC2.2□□□□□ -2.06
SYPP08247 HMGN2P23-201ENST00000456759 269 ntBASIC2.2□□□□□ -2.06
SYPP08247 RNU6-158P-201ENST00000517104 100 ntBASIC2.2□□□□□ -2.06
SYPP08247 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.2□□□□□ -2.06
SYPP08247 MIR203B-201ENST00000636080 86 ntBASIC2.2□□□□□ -2.06
SYPP08247 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
SYPP08247 RNU6-917P-201ENST00000516294 104 ntBASIC2.19□□□□□ -2.06
SYPP08247 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
SYPP08247 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
SYPP08247 RNU2-19P-201ENST00000517288 84 ntBASIC2.19□□□□□ -2.06
SYPP08247 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
SYPP08247 RNU6-363P-201ENST00000362895 105 ntBASIC2.18□□□□□ -2.06
SYPP08247 Y_RNA.507-201ENST00000384500 99 ntBASIC2.18□□□□□ -2.06
SYPP08247 MIR194-1-201ENST00000384892 85 ntBASIC2.18□□□□□ -2.06
SYPP08247 RNU6-970P-201ENST00000516312 107 ntBASIC2.18□□□□□ -2.06
SYPP08247 RNU6-295P-201ENST00000516901 104 ntBASIC2.18□□□□□ -2.06
SYPP08247 MIR548AE2-201ENST00000583456 67 ntBASIC2.18□□□□□ -2.06
SYPP08247 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
SYPP08247 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SYPP08247 RNU6-1131P-201ENST00000364955 107 ntBASIC2.17□□□□□ -2.06
SYPP08247 RNU6-1067P-201ENST00000384752 107 ntBASIC2.17□□□□□ -2.06
SYPP08247 SNORA26.9-201ENST00000391322 122 ntBASIC2.17□□□□□ -2.06
SYPP08247 MIR1270-201ENST00000459320 83 ntBASIC2.17□□□□□ -2.06
SYPP08247 snoU13.16-201ENST00000459350 104 ntBASIC2.17□□□□□ -2.06
SYPP08247 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
SYPP08247 RNA5SP33-201ENST00000516687 98 ntBASIC2.17□□□□□ -2.06
SYPP08247 DEFB131E-201ENST00000532329 154 ntBASIC2.17□□□□□ -2.06
SYPP08247 RNU6-1099P-201ENST00000363533 107 ntBASIC2.16□□□□□ -2.06
SYPP08247 MIR488-201ENST00000365739 83 ntBASIC2.16□□□□□ -2.06
SYPP08247 RNU6-49P-201ENST00000384256 107 ntBASIC2.16□□□□□ -2.06
SYPP08247 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
SYPP08247 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
SYPP08247 MTATP8P2-201ENST00000435212 202 ntBASIC2.16□□□□□ -2.06
SYPP08247 RNU7-43P-201ENST00000516554 64 ntBASIC2.16□□□□□ -2.06
SYPP08247 MIR8055-201ENST00000610739 97 ntBASIC2.16□□□□□ -2.06
SYPP08247 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.16□□□□□ -2.06
SYPP08247 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SYPP08247 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SYPP08247 Y_RNA.155-201ENST00000363632 101 ntBASIC2.15□□□□□ -2.07
SYPP08247 RNU4-36P-201ENST00000364294 144 ntBASIC2.15□□□□□ -2.07
SYPP08247 RNU4-67P-201ENST00000364569 141 ntBASIC2.15□□□□□ -2.07
SYPP08247 AC019129.1-201ENST00000403786 261 ntBASIC2.15□□□□□ -2.07
SYPP08247 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.15□□□□□ -2.07
SYPP08247 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.15□□□□□ -2.07
SYPP08247 MIR6895-201ENST00000613497 78 ntBASIC2.15□□□□□ -2.07
SYPP08247 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SYPP08247 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SYPP08247 RNY3P2-201ENST00000362918 102 ntBASIC2.14□□□□□ -2.07
SYPP08247 Y_RNA.93-201ENST00000363066 109 ntBASIC2.14□□□□□ -2.07
SYPP08247 Y_RNA.338-201ENST00000365320 114 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms