Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.24□□□□□ -2.05
SRGAP3O43295 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SRGAP3O43295 RNU6-816P-201ENST00000390914 107 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 RNU6-1268P-201ENST00000391214 107 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 RNU6-1239P-201ENST00000391310 107 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 RNU2-40P-201ENST00000410833 196 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 AL512326.2-201ENST00000426359 151 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 RNU7-67P-201ENST00000459003 62 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 snoU13.27-201ENST00000459278 104 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
SRGAP3O43295 AC004812.1-201ENST00000540773 146 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.24□□□□□ -2.05
SRGAP3O43295 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.24□□□□□ -2.05
SRGAP3O43295 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
SRGAP3O43295 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SRGAP3O43295 RNU6-112P-201ENST00000363599 104 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 SNORA70.7-201ENST00000384159 133 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 SNORA26.9-201ENST00000391322 122 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 SUMO2P12-201ENST00000405924 140 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 RNU6-958P-201ENST00000516995 106 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 SUB1P4-201ENST00000566062 339 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 AC084768.2-201ENST00000622736 221 ntBASIC2.23□□□□□ -2.05
SRGAP3O43295 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
SRGAP3O43295 MIR764-201ENST00000390811 85 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 RPS23P4-201ENST00000487908 423 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 RN7SL274P-201ENST00000492268 272 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 MIR4524B-201ENST00000581569 115 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 SNORD3E-202ENST00000627253 216 ntBASIC2.22□□□□□ -2.05
SRGAP3O43295 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.22□□□□□ -2.05
SRGAP3O43295 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 Y_RNA.531-201ENST00000384589 121 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 RNU6-296P-201ENST00000384608 107 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 MIR1912-201ENST00000410389 80 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 POLR2J4-204ENST00000418424 324 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 PGBD4P5-201ENST00000445958 426 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 RNU7-113P-201ENST00000459273 62 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
SRGAP3O43295 AC113410.1-201ENST00000505029 247 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 RNU7-53P-201ENST00000516705 60 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 RNA5SP481-201ENST00000516814 122 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 MIR4419B-201ENST00000577260 68 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 MIR4769-201ENST00000584126 77 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 AL513423.1-201ENST00000621695 132 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 AC095038.3-201ENST00000634439 195 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
SRGAP3O43295 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SRGAP3O43295 AL442644.1-201ENST00000454390 3105 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 Y_RNA.171-201ENST00000363760 102 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 RNU6-294P-201ENST00000364999 102 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 RNU6-49P-201ENST00000384256 107 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 Y_RNA.507-201ENST00000384500 99 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 MIR526A1-201ENST00000384897 85 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 MIR660-201ENST00000385235 97 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 MIR4791-201ENST00000607666 84 ntBASIC2.2□□□□□ -2.06
SRGAP3O43295 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SRGAP3O43295 SNORA22.1-201ENST00000362701 134 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 Y_RNA.155-201ENST00000363632 101 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 RPS29P29-201ENST00000456396 171 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 SNORD123-201ENST00000459473 70 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 AC099513.1-201ENST00000490423 301 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 RNU6-904P-201ENST00000516206 101 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 MIR3618-201ENST00000580330 88 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 Y_RNA.818-201ENST00000618813 71 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 AC087741.2-201ENST00000619415 172 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 MIR1255B1-201ENST00000636325 63 ntBASIC2.19□□□□□ -2.06
SRGAP3O43295 Y_RNA.78-201ENST00000362970 110 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU4-36P-201ENST00000364294 144 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 MIR488-201ENST00000365739 83 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU6-1190P-201ENST00000410811 104 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 MIR548AR-201ENST00000582191 57 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 Y_RNA.773-201ENST00000607168 90 ntBASIC2.18□□□□□ -2.06
SRGAP3O43295 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SRGAP3O43295 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
SRGAP3O43295 RNU6-661P-201ENST00000362409 107 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 Y_RNA.107-201ENST00000363190 121 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 RNU6-237P-201ENST00000515985 71 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 RNU6-250P-201ENST00000516958 103 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 DEFB131E-201ENST00000532329 154 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 FAM106DP-201ENST00000586416 501 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 AC243994.1-201ENST00000618627 109 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 U1.36-201ENST00000620684 176 ntBASIC2.17□□□□□ -2.06
SRGAP3O43295 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SRGAP3O43295 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms