Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR342-201ENST00000362212 99 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNU6-801P-201ENST00000364087 105 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNY3P5-201ENST00000384127 102 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNU6-455P-201ENST00000384681 107 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 SNORD77.4-201ENST00000516158 81 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 AC011476.5-201ENST00000615594 130 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 MIR6738-201ENST00000619620 64 ntBASIC-1.29□□□□□ -2.62
HMGB3O15347 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 RNU6-831P-201ENST00000384548 107 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 MIR626-201ENST00000385032 94 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGB3O15347 MTND5P5-201ENST00000503764 376 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 AC019235.1-201ENST00000503847 207 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.3□□□□□ -2.62
HMGB3O15347 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.3□□□□□ -2.62
HMGB3O15347 AC005899.2-201ENST00000584353 90 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 AL049861.1-201ENST00000603130 150 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 AC073114.1-201ENST00000612027 490 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 MIR6841-201ENST00000637129 72 ntBASIC-1.3□□□□□ -2.62
HMGB3O15347 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.3□□□□□ -2.62
HMGB3O15347 RNA5SP133-201ENST00000363368 119 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 RNU6-593P-201ENST00000364716 112 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 RNU6-99P-201ENST00000364721 107 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 MIR181B2-201ENST00000385004 89 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 MIR204-201ENST00000385200 110 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 MIR4324-201ENST00000584846 72 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 AC022960.3-201ENST00000619794 441 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 AC090617.10-201ENST00000624308 134 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 AC099654.14-201ENST00000638599 341 ntBASIC-1.31□□□□□ -2.62
HMGB3O15347 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 RNU6-144P-201ENST00000383951 107 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 SNORA18-201ENST00000384416 132 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 RNU6-881P-201ENST00000516813 102 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 AC100767.1-201ENST00000528178 123 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 MIR4790-201ENST00000577799 79 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 MTND5P26-201ENST00000426018 1752 ntBASIC-1.32□□□□□ -2.62
HMGB3O15347 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 AC009161.1-201ENST00000417306 376 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 TPTEP1-208ENST00000636884 213 ntBASIC-1.33□□□□□ -2.62
HMGB3O15347 RNY4P3-201ENST00000365254 95 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 MIR9-2-201ENST00000384838 87 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 RNU6-780P-201ENST00000391030 104 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 AL603914.1-201ENST00000401964 204 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 RNU6-126P-201ENST00000516685 103 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 MIR548H5-201ENST00000580314 60 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 MIR3145-201ENST00000580727 82 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.34□□□□□ -2.62
HMGB3O15347 uc_338.10-201ENST00000621872 182 ntBASIC-1.34□□□□□ -2.62
HMGB3O15347 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 RNU4-36P-201ENST00000364294 144 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 RNU6-274P-201ENST00000459566 107 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 RNU6-175P-201ENST00000516896 107 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 RNU6-365P-201ENST00000517113 106 ntBASIC-1.35□□□□□ -2.63
HMGB3O15347 RNU6-899P-201ENST00000363947 107 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 RNU1-141P-201ENST00000364623 158 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 RNU6-449P-201ENST00000383914 107 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 RNU6-10P-201ENST00000384036 107 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 RNU6-308P-201ENST00000390957 107 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 MTND1P14-201ENST00000427400 950 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 snoU13.11-201ENST00000459219 104 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 AP003733.2-201ENST00000529409 171 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 AC093424.1-201ENST00000604999 338 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 AC024614.3-201ENST00000637860 256 ntBASIC-1.36□□□□□ -2.63
HMGB3O15347 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 SNORA22.1-201ENST00000362701 134 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 SNORD114-29-201ENST00000364819 70 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU6-24P-201ENST00000384440 107 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 MIR587-201ENST00000384845 96 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU6-383P-201ENST00000410864 94 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU6-373P-201ENST00000411247 98 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 AL445193.1-201ENST00000441183 141 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU7-79P-201ENST00000516082 62 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 RNU6-307P-201ENST00000516743 106 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 MIR3920-201ENST00000581751 86 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 U6.109-201ENST00000636749 87 ntBASIC-1.37□□□□□ -2.63
HMGB3O15347 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.38□□□□□ -2.63
HMGB3O15347 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms