Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR8485-201ENST00000401372 91 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 AL033528.1-201ENST00000453780 140 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORA18.6-201ENST00000516792 115 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 MIR4273-201ENST00000582824 84 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 U4.1-201ENST00000620349 87 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORA22.1-201ENST00000362701 134 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 AC098826.2-201ENST00000452011 651 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU7-87P-201ENST00000459343 62 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 RNA5SP180-201ENST00000516181 101 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 AL442663.2-201ENST00000554385 511 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 MIR4770-201ENST00000579149 58 ntBASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.99□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-874P-201ENST00000362390 105 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1216P-201ENST00000362590 107 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.52-201ENST00000362760 96 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-254P-201ENST00000363377 107 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU4-20P-201ENST00000365601 151 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORA40.3-201ENST00000390964 122 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1158P-201ENST00000391167 107 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-588P-201ENST00000410281 105 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORD18.2-201ENST00000459604 70 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 UBE2V1P12-201ENST00000503954 474 ntBASIC-2□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORD61-201ENST00000384252 73 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU7-134P-201ENST00000458997 64 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORD2-201ENST00000459163 69 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-470P-201ENST00000515954 104 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 AL158211.2-201ENST00000607282 395 ntBASIC-2.01□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-888P-201ENST00000363010 101 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-226P-201ENST00000363778 107 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.410-201ENST00000383992 113 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORA20-201ENST00000384662 132 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 AF228730.3-201ENST00000436691 102 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 AC091951.2-201ENST00000500762 203 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 AC007012.1-201ENST00000567192 175 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 AC093783.1-201ENST00000612976 329 ntBASIC-2.02□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-1301P-201ENST00000362724 104 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU6-297P-201ENST00000384636 107 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 SNORD37.1-201ENST00000390968 65 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 RNA5SP401-201ENST00000515920 127 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 RNU7-35P-201ENST00000517174 62 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 AC005357.1-201ENST00000588399 301 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 AL021707.8-201ENST00000609428 183 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 MIR6129-201ENST00000616087 109 ntBASIC-2.03□□□□□ -2.73
CHKB-CPT1BH3BT56 Y_RNA.28-201ENST00000362554 111 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.72-201ENST00000362894 103 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 SNORD114-17-201ENST00000364699 75 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 AL160004.2-201ENST00000432935 350 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 MIR4662B-201ENST00000579498 81 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 AL138960.2-201ENST00000625145 535 ntBASIC-2.04□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 SNORD113-6-201ENST00000363345 75 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.351-201ENST00000365436 96 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-524P-201ENST00000384270 107 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-248P-201ENST00000410720 107 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 AC024933.1-201ENST00000608472 348 ntBASIC-2.05□□□□□ -2.74
CHKB-CPT1BH3BT56 MIR409-201ENST00000362237 79 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-522P-201ENST00000364497 107 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU4-70P-201ENST00000384579 139 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU6-592P-201ENST00000411333 103 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 MIR2113-201ENST00000459007 91 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU7-141P-201ENST00000459304 62 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 SNORD42A-201ENST00000459584 64 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.06□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU4-80P-201ENST00000363200 141 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.295-201ENST00000364918 102 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 MIR514A2-201ENST00000385131 88 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 MIR514A3-201ENST00000385132 88 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU7-195P-201ENST00000458793 62 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 AC107027.2-201ENST00000512197 115 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 AC145350.1-201ENST00000567426 208 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 AC027449.1-201ENST00000608890 407 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 AL008718.3-201ENST00000610217 321 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 AC091932.4-201ENST00000623386 200 ntBASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.07□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.135-201ENST00000363439 95 ntBASIC-2.08□□□□□ -2.74
CHKB-CPT1BH3BT56 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.08□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU7-80P-201ENST00000459562 61 ntBASIC-2.08□□□□□ -2.74
CHKB-CPT1BH3BT56 AC083904.1-201ENST00000487828 231 ntBASIC-2.08□□□□□ -2.74
CHKB-CPT1BH3BT56 SNORD77.4-201ENST00000516158 81 ntBASIC-2.08□□□□□ -2.74
CHKB-CPT1BH3BT56 RNU7-137P-201ENST00000516788 62 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms