Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-1228P-201ENST00000391014 107 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORA40.5-201ENST00000391061 128 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC023449.1-201ENST00000454464 154 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNA5SP153-201ENST00000516498 76 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 AP000942.4-201ENST00000604811 241 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-94P-201ENST00000607728 107 ntBASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.61□□□□□ -2.31
TMX2-CTNND1H3BSU7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.20-201ENST00000362479 113 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD77.3-201ENST00000391113 65 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.622-201ENST00000411091 108 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 snoU13.21-201ENST00000459368 105 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-1299P-201ENST00000516316 100 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-1045P-201ENST00000516321 107 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-365P-201ENST00000517113 106 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR4503-201ENST00000582187 83 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.6□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.241-201ENST00000364470 117 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD113.3-201ENST00000364630 78 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 Y_RNA.440-201ENST00000384120 114 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 MIR605-201ENST00000385078 83 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 MT-TN-201ENST00000387400 73 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 SNORD111-201ENST00000408139 94 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU4-43P-201ENST00000410628 137 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC092628.1-201ENST00000436250 252 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU7-73P-201ENST00000458743 63 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 snoU13.16-201ENST00000459350 104 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 RNU6-504P-201ENST00000516568 104 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 U6.104-201ENST00000637979 90 ntBASIC0.59□□□□□ -2.31
TMX2-CTNND1H3BSU7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.193-201ENST00000363979 102 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.432-201ENST00000384087 111 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORA27-201ENST00000384323 126 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 MTND3P2-201ENST00000438452 342 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 PSMC1P5-201ENST00000512850 177 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR4308-201ENST00000580634 81 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL353621.2-201ENST00000605340 133 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC134878.1-201ENST00000619901 243 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR377-201ENST00000362145 69 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.54-201ENST00000362766 105 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-978P-201ENST00000364371 103 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.262-201ENST00000364641 102 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-396P-201ENST00000365369 105 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-574P-201ENST00000384265 107 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.477-201ENST00000384352 108 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.556-201ENST00000384677 113 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORA26.6-201ENST00000391256 115 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR942-201ENST00000401111 86 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.626-201ENST00000411288 95 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 HMGN1P33-201ENST00000432945 451 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RPS29P24-201ENST00000486345 171 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR2115-201ENST00000516657 100 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-126P-201ENST00000516685 103 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-958P-201ENST00000516995 106 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR3128-201ENST00000581957 66 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC062037.2-201ENST00000610137 73 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.350-201ENST00000365409 98 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU4-17P-201ENST00000365598 141 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR1827-201ENST00000408549 66 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR548H3-201ENST00000408771 118 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 RPS3AP1-201ENST00000413190 320 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 FABP5P4-201ENST00000437203 171 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC113410.1-201ENST00000505029 247 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-998P-201ENST00000515894 101 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 MIR6740-201ENST00000618268 113 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 AC243829.3-201ENST00000622177 108 ntBASIC0.56□□□□□ -2.32
TMX2-CTNND1H3BSU7 SNORD27-201ENST00000363981 72 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-205P-201ENST00000390858 107 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU2-70P-201ENST00000410718 179 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU6-602P-201ENST00000411155 105 ntBASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.55□□□□□ -2.32
TMX2-CTNND1H3BSU7 RNU7-67P-201ENST00000459003 62 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms