Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL020996.3-201ENST00000606617 222 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 RNU1-133P-201ENST00000364867 167 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 AL603914.1-201ENST00000401964 204 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 MTATP6P21-201ENST00000440681 189 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 RNU7-70P-201ENST00000516941 66 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 AP001340.1-201ENST00000624405 217 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 Z97988.1-201ENST00000637697 135 ntBASIC1.26□□□□□ -2.21
TCRBV7S3A2A0A539 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 Y_RNA.363-201ENST00000365529 113 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 Y_RNA.488-201ENST00000384403 102 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-125P-201ENST00000384505 107 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 AC011603.4-201ENST00000611325 277 ntBASIC1.25□□□□□ -2.21
TCRBV7S3A2A0A539 MIR103A2-201ENST00000362154 78 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 MIR342-201ENST00000362212 99 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 SNORD18B-201ENST00000365659 72 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-746P-201ENST00000384112 109 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-1319P-201ENST00000390855 104 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-747P-201ENST00000390928 104 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-241P-201ENST00000391148 104 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA26.6-201ENST00000391256 115 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNA5SP261-201ENST00000410536 106 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-177P-201ENST00000411257 104 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 RNU1-98P-201ENST00000458992 160 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA25.12-201ENST00000516202 82 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 AL596211.1-201ENST00000569873 2277 ntBASIC1.24□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 RNU7-95P-201ENST00000459222 64 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 SNORD79.1-201ENST00000516069 84 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 Y_RNA.703-201ENST00000516846 111 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 MIR6717-201ENST00000622747 73 ntBASIC1.23□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-349P-201ENST00000362402 107 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-396P-201ENST00000365369 105 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 Y_RNA.430-201ENST00000384081 110 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNY1P6-201ENST00000384193 109 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 MT-TN-201ENST00000387400 73 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-460P-201ENST00000391158 108 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA11.2-201ENST00000408318 127 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 Y_RNA.686-201ENST00000516548 134 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 MIR2115-201ENST00000516657 100 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 SEPT14P17-201ENST00000617978 177 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 MIR6516-201ENST00000630554 81 ntBASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA1.1-201ENST00000364671 133 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.343-201ENST00000365354 112 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 SNORD50.2-201ENST00000365465 70 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.420-201ENST00000384043 110 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.568-201ENST00000384742 113 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 SNORA75.2-201ENST00000391138 150 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 SNORA75.3-201ENST00000391231 150 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-613P-201ENST00000410412 108 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.651-201ENST00000459380 103 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-346P-201ENST00000516288 111 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 AL022345.2-201ENST00000606307 135 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 AC021613.1-201ENST00000623880 111 ntBASIC1.21□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-309P-201ENST00000364573 106 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-955P-201ENST00000410497 104 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 AC090844.1-201ENST00000422019 156 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-426P-201ENST00000516464 97 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.690-201ENST00000516603 95 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 AP001328.1-201ENST00000528550 176 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 MIR3121-201ENST00000579680 77 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 MIR6841-201ENST00000637129 72 ntBASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
TCRBV7S3A2A0A539 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 MIR377-201ENST00000362145 69 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-915P-201ENST00000364943 103 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 SNORD38B-201ENST00000384690 67 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 RNU6-602P-201ENST00000411155 105 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 RPS3AP1-201ENST00000413190 320 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 RNU7-45P-201ENST00000459460 63 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 Y_RNA.692-201ENST00000516627 105 ntBASIC1.19□□□□□ -2.22
TCRBV7S3A2A0A539 MIR3133-201ENST00000583157 78 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms