Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RN7SL489P-201ENST00000486185 223 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 RN7SL327P-201ENST00000488659 223 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 SNORA70.14-201ENST00000516205 110 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 AL357312.1-201ENST00000603879 298 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 AC069114.2-201ENST00000604699 304 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 AC067747.1-201ENST00000608026 250 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 RN7SL853P-201ENST00000617250 223 ntBASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC61Q9Y6R9 PWAR6-201ENST00000552334 4618 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 MIR449A-201ENST00000362113 91 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 RNU6-1019P-201ENST00000364424 107 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 SNORD115-31-201ENST00000365318 82 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 MIR548U-201ENST00000390728 81 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 RNU6-205P-201ENST00000390858 107 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 HSPE1P9-201ENST00000440046 311 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 RPL23AP6-201ENST00000446637 472 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 SNRPGP12-201ENST00000449481 213 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 SNORD59.2-201ENST00000516873 68 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 MIR3169-201ENST00000578032 83 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 AC090897.1-201ENST00000580909 226 ntBASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC61Q9Y6R9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 SNORA38-201ENST00000363946 132 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 MIR591-201ENST00000385290 95 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 AC108938.1-201ENST00000451204 136 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 RNU6-850P-201ENST00000516934 103 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 AC104996.3-201ENST00000590718 94 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 AC007318.2-201ENST00000620999 243 ntBASIC4.1□□□□□ -1.75
CCDC61Q9Y6R9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 Y_RNA.12-201ENST00000362393 112 ntBASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 HSPE1P24-201ENST00000450782 238 ntBASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 HMGN1P18-201ENST00000457642 277 ntBASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 RN7SL20P-201ENST00000488827 297 ntBASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 MIR4319-201ENST00000577285 85 ntBASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC61Q9Y6R9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC61Q9Y6R9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC61Q9Y6R9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RNA5SP126-201ENST00000365092 109 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RNU6-614P-201ENST00000384369 107 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 Y_RNA.491-201ENST00000384417 107 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RNA5SP237-201ENST00000410414 113 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RPS27P21-201ENST00000486977 252 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RNU1-143P-201ENST00000516296 146 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 YWHAEP2-201ENST00000580066 112 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 YWHAEP3-201ENST00000582767 121 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 U1.23-201ENST00000610293 146 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 RNU1-68P-201ENST00000615382 146 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 U6.59-201ENST00000615686 107 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 U1.39-201ENST00000621562 146 ntBASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC61Q9Y6R9 AC062016.1-201ENST00000355719 319 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 RNU6-301P-201ENST00000384277 107 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 SNORA48.8-201ENST00000391324 134 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 RNA5SP184-201ENST00000411071 108 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 AC107016.2-201ENST00000547968 190 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 MIR4500-201ENST00000579472 76 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 MIR3064-201ENST00000581130 66 ntBASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC61Q9Y6R9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 RNU6-571P-201ENST00000384128 107 ntBASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 RNU6-630P-201ENST00000391258 106 ntBASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 AC027119.1-201ENST00000440877 241 ntBASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 MIR2114-201ENST00000516645 80 ntBASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC61Q9Y6R9 SNORA68.1-201ENST00000364537 132 ntBASIC4.05□□□□□ -1.76
CCDC61Q9Y6R9 AC005786.1-201ENST00000588553 154 ntBASIC4.05□□□□□ -1.76
CCDC61Q9Y6R9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC61Q9Y6R9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC61Q9Y6R9 AC104027.1-201ENST00000521887 300 ntBASIC4.04□□□□□ -1.76
CCDC61Q9Y6R9 AC079600.2-201ENST00000550076 130 ntBASIC4.04□□□□□ -1.76
CCDC61Q9Y6R9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC61Q9Y6R9 Y_RNA.36-201ENST00000362602 112 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 SNORA25.4-201ENST00000363666 124 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 RNU6-1031P-201ENST00000384773 107 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 RNA5SP217-201ENST00000515959 91 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 AC141846.1-201ENST00000568348 142 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 SNORD92-201ENST00000585078 85 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 XIST_intron.1-201ENST00000619444 68 ntBASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC61Q9Y6R9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 RNU6-132P-201ENST00000383863 107 ntBASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 RNU1-109P-201ENST00000383960 147 ntBASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 RNU6-895P-201ENST00000384125 103 ntBASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 AC087499.2-201ENST00000432861 149 ntBASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC61Q9Y6R9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms