Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC099799.1-201ENST00000439809 192 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 AL138752.1-201ENST00000452964 351 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 RNU6-126P-201ENST00000516685 103 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 RNU6-765P-201ENST00000516916 99 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 AC011373.1-201ENST00000607270 237 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 MIR6082-201ENST00000613604 109 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 AC022079.1-201ENST00000621546 602 ntBASIC-0.39□□□□□ -2.47
RHBDD3Q9Y3P4 SNORA18.1-201ENST00000363418 128 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 RNU6-652P-201ENST00000365488 107 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 RNU7-96P-201ENST00000459535 64 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 RNU7-149P-201ENST00000516739 59 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 MIR4491-201ENST00000581087 68 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 MIR4636-201ENST00000582271 80 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 MIR5690-201ENST00000583739 73 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 MIR4639-201ENST00000584938 69 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.4□□□□□ -2.47
RHBDD3Q9Y3P4 RNY3P11-201ENST00000364153 102 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-708P-201ENST00000384217 107 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD77.3-201ENST00000391113 65 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 AC006600.1-201ENST00000572529 153 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 MIR3145-201ENST00000580727 82 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 MIR548AD-201ENST00000584780 82 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 VN1R91P-201ENST00000594377 169 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 AC006157.1-201ENST00000611750 366 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 AL442067.1-201ENST00000613261 223 ntBASIC-0.41□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-35P-201ENST00000384530 107 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 MIR215-201ENST00000384858 110 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 MTND4LP11-201ENST00000422184 280 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 MTATP6P26-201ENST00000445926 662 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 RNU7-45P-201ENST00000459460 63 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD36C-201ENST00000516733 66 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 RNU7-110P-201ENST00000516891 62 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.42□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-899P-201ENST00000363947 107 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 RNU4-24P-201ENST00000364565 139 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-535P-201ENST00000384722 107 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 MIR548I3-201ENST00000408378 149 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 RNA5SP261-201ENST00000410536 106 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 AC010655.3-201ENST00000478818 450 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 SNORA25.16-201ENST00000516741 121 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 MIR4493-201ENST00000584016 73 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 AC138305.3-201ENST00000624988 240 ntBASIC-0.43□□□□□ -2.48
RHBDD3Q9Y3P4 MIR101-1-201ENST00000362265 75 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 RNU4-73P-201ENST00000363164 141 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 SNORA63.5-201ENST00000363548 123 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD63-201ENST00000384262 68 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 SNORA26.6-201ENST00000391256 115 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 MIR1265-201ENST00000408444 86 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 RPL21P38-201ENST00000418090 167 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 RNU2-11P-201ENST00000459191 187 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-897P-201ENST00000517135 105 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 MIR4677-201ENST00000584153 80 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 AC122108.2-201ENST00000611946 526 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 AC048344.4-201ENST00000619744 527 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 MIR6514-201ENST00000622549 70 ntBASIC-0.44□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-801P-201ENST00000364087 105 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-726P-201ENST00000364680 107 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD24-201ENST00000383884 75 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 SNORA72.6-201ENST00000384520 129 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-310P-201ENST00000384655 107 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-21P-201ENST00000384710 107 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 MIR548A2-201ENST00000384956 97 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 AL160004.2-201ENST00000432935 350 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 RNA5SP395-201ENST00000516567 118 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 AL021707.8-201ENST00000609428 183 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 AC133104.2-201ENST00000615272 193 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 AL662814.1-201ENST00000617364 121 ntBASIC-0.45□□□□□ -2.48
RHBDD3Q9Y3P4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD116-2-201ENST00000384274 95 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 SNORD116-6-201ENST00000384711 96 ntBASIC-0.46□□□□□ -2.48
RHBDD3Q9Y3P4 MIR1277-201ENST00000408536 78 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms