Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AL078603.1-201ENST00000603824 313 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 IGLL4P-201ENST00000614590 133 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 SNORA1B-201ENST00000362535 133 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6-888P-201ENST00000363010 101 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6-938P-201ENST00000411285 103 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU7-80P-201ENST00000459562 61 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6-795P-201ENST00000516323 103 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU2-34P-201ENST00000516534 121 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 MIR4762-201ENST00000585261 75 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 AC012531.5-201ENST00000611375 151 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 AL442644.1-201ENST00000454390 3105 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6-509P-201ENST00000363519 107 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU4-16P-201ENST00000364737 141 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6-998P-201ENST00000515894 101 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP182-201ENST00000516064 82 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 AC087685.1-201ENST00000587507 141 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 MIR376A2-201ENST00000636782 80 ntBASIC1.48□□□□□ -2.17
NOTCH3Q9UM47 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 SNORD58A-201ENST00000383875 65 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 RNU6-409P-201ENST00000384114 104 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.611-201ENST00000410682 108 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 AL445685.2-201ENST00000422551 342 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 RNU2-11P-201ENST00000459191 187 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1006P-201ENST00000516998 103 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1096P-201ENST00000517089 102 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 AP002004.2-201ENST00000531656 154 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 AC091932.4-201ENST00000623386 200 ntBASIC1.47□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.203-201ENST00000364106 102 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 RNU6-644P-201ENST00000391155 98 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 RN7SKP200-201ENST00000410564 320 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AL022718.1-201ENST00000412004 84 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AL035398.1-201ENST00000430869 322 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC233266.1-201ENST00000454518 96 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR5002-201ENST00000584713 97 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AL353149.1-201ENST00000610667 244 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC242852.1-201ENST00000612151 96 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC244015.1-201ENST00000622301 99 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR1248-201ENST00000629190 106 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR522-201ENST00000385071 87 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 HMGN2P18-201ENST00000450680 270 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR1270-201ENST00000459320 83 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 RNU7-99P-201ENST00000516271 62 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 RNU7-6P-201ENST00000516845 62 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 Y_RNA.705-201ENST00000516862 110 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AP003484.1-201ENST00000530974 250 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR4448-201ENST00000584360 86 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC022709.1-201ENST00000615967 87 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 MIR7157-201ENST00000635801 60 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 AC091152.2-201ENST00000591628 2569 ntBASIC1.46□□□□□ -2.18
NOTCH3Q9UM47 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 SNORA33-201ENST00000363664 130 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 SNORA14A-201ENST00000364773 135 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNA5SP138-201ENST00000365098 114 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU6-1201P-201ENST00000384227 107 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 Y_RNA.467-201ENST00000384297 102 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 SNORA27-201ENST00000384323 126 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU6-24P-201ENST00000384440 107 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 MIR518F-201ENST00000384973 87 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU7-113P-201ENST00000459273 62 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 SNORA31.4-201ENST00000516049 129 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU6-341P-201ENST00000516973 96 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 AC110079.1-202ENST00000635213 138 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU6-862P-201ENST00000362804 105 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU1-72P-201ENST00000362976 153 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 SNORA1.1-201ENST00000364671 133 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNA5SP338-201ENST00000410495 85 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU2-37P-201ENST00000410695 177 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 Y_RNA.620-201ENST00000411009 88 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 AL161788.1-201ENST00000441805 169 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 RNU6-586P-201ENST00000517265 104 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 XIST_intron.1-201ENST00000619444 68 ntBASIC1.45□□□□□ -2.18
NOTCH3Q9UM47 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
NOTCH3Q9UM47 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms