Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SNORD115-10-201ENST00000365073 81 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 SNORD115-43-201ENST00000365503 82 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 SNORD115-36-201ENST00000365629 82 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 SNORD61-201ENST00000384252 73 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 RNU6-342P-201ENST00000384521 104 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 MIR19B1-201ENST00000384829 87 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 MIR598-201ENST00000384868 97 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 MIR518F-201ENST00000384973 87 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 RNU4-43P-201ENST00000410628 137 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 Y_RNA.626-201ENST00000411288 95 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 RNU6-794P-201ENST00000517261 64 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 AC109810.1-201ENST00000534066 224 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 SNORD115-40-201ENST00000606510 82 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 AC141273.2-201ENST00000618989 130 ntBASIC1.77□□□□□ -2.13
USP35Q9P2H5 SNORD45.3-201ENST00000363836 72 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 RNU1-124P-201ENST00000363861 145 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 Y_RNA.199-201ENST00000364014 102 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 MIR548A2-201ENST00000384956 97 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 MIR548J-201ENST00000408833 112 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 RPS23P4-201ENST00000487908 423 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.76□□□□□ -2.13
USP35Q9P2H5 RNA5SP436-201ENST00000516020 115 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 RNA5SP404-201ENST00000517118 132 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 MIR4744-201ENST00000581563 82 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 MIR6767-201ENST00000637302 66 ntBASIC1.76□□□□□ -2.13
USP35Q9P2H5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USP35Q9P2H5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.75□□□□□ -2.13
USP35Q9P2H5 MIR103A2-201ENST00000362154 78 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 SNORA51.10-201ENST00000384418 136 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 MIR150-201ENST00000385048 84 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 SNORA40.6-201ENST00000391153 128 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.75□□□□□ -2.13
USP35Q9P2H5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.75□□□□□ -2.13
USP35Q9P2H5 RNU7-21P-201ENST00000459430 62 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 RNU6-197P-201ENST00000516680 100 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 AC130289.1-201ENST00000577321 73 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 MIR151B-201ENST00000584249 96 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 MIR4791-201ENST00000607666 84 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 MIR6788-201ENST00000618842 66 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 AC134878.1-201ENST00000619901 243 ntBASIC1.75□□□□□ -2.13
USP35Q9P2H5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USP35Q9P2H5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USP35Q9P2H5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 Y_RNA.205-201ENST00000364128 113 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 SNORA79-201ENST00000408376 140 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 AC063976.4-201ENST00000421971 163 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 RPS26P48-201ENST00000491713 339 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 RNY3P16-201ENST00000516338 101 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USP35Q9P2H5 MIR3660-201ENST00000584845 100 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 AC009779.6-201ENST00000603972 165 ntBASIC1.74□□□□□ -2.13
USP35Q9P2H5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 Y_RNA.274-201ENST00000364714 101 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 Y_RNA.308-201ENST00000365043 101 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 SNORA24-201ENST00000384096 131 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 RNU6-939P-201ENST00000384634 107 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 Y_RNA.552-201ENST00000384665 112 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 MIR758-201ENST00000390227 88 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 SNORA40.5-201ENST00000391061 128 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 RNU7-40P-201ENST00000516397 64 ntBASIC1.73□□□□□ -2.13
USP35Q9P2H5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.73□□□□□ -2.13
USP35Q9P2H5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 Y_RNA.374-201ENST00000365606 101 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 Y_RNA.410-201ENST00000383992 113 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 SNORA75.2-201ENST00000391138 150 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 SNORA75.3-201ENST00000391231 150 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 MIR1185-1-201ENST00000408598 86 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 AL392103.1-201ENST00000447000 198 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 RNU7-90P-201ENST00000459216 62 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 RNU6-138P-201ENST00000515952 107 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 SEPT14P17-201ENST00000617978 177 ntBASIC1.72□□□□□ -2.13
USP35Q9P2H5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP35Q9P2H5 Y_RNA.241-201ENST00000364470 117 ntBASIC1.71□□□□□ -2.14
USP35Q9P2H5 RNU6-1270P-201ENST00000517128 108 ntBASIC1.71□□□□□ -2.14
USP35Q9P2H5 AP003484.1-201ENST00000530974 250 ntBASIC1.71□□□□□ -2.14
USP35Q9P2H5 AC243994.1-201ENST00000618627 109 ntBASIC1.71□□□□□ -2.14
USP35Q9P2H5 MT-TR-201ENST00000387439 65 ntBASIC1.7□□□□□ -2.14
USP35Q9P2H5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.7□□□□□ -2.14
USP35Q9P2H5 RNU6-938P-201ENST00000411285 103 ntBASIC1.7□□□□□ -2.14
USP35Q9P2H5 AC002429.1-201ENST00000437672 148 ntBASIC1.7□□□□□ -2.14
USP35Q9P2H5 SNORA25.3-201ENST00000363205 127 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 RNU6-200P-201ENST00000364743 107 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 MIR570-201ENST00000384917 97 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 RNU6-578P-201ENST00000390980 103 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 RNU6-493P-201ENST00000391321 108 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 RPS29P29-201ENST00000456396 171 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 MTND1P7-201ENST00000632801 297 ntBASIC1.69□□□□□ -2.14
USP35Q9P2H5 RNU6-47P-201ENST00000383866 107 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 Y_RNA.435-201ENST00000384095 112 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 Y_RNA.515-201ENST00000384535 112 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 snoU13.16-201ENST00000459350 104 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 AC068338.1-201ENST00000565567 176 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 AC108706.1-201ENST00000611053 297 ntBASIC1.68□□□□□ -2.14
USP35Q9P2H5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP35Q9P2H5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.67□□□□□ -2.14
USP35Q9P2H5 Y_RNA.83-201ENST00000363005 113 ntBASIC1.67□□□□□ -2.14
USP35Q9P2H5 RNU6-923P-201ENST00000364753 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms