Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF216Q9NWF9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF216Q9NWF9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF216Q9NWF9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF216Q9NWF9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF216Q9NWF9 RNU6-403P-201ENST00000363163 104 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 RNU1-91P-201ENST00000364746 163 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 U8.13-201ENST00000390842 128 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 RNA5SP306-201ENST00000411087 107 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 AC104332.2-201ENST00000429959 156 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 AL139132.1-201ENST00000431587 344 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 GTF3AP2-201ENST00000557014 266 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 MIR3126-201ENST00000577443 74 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 RN7SL600P-201ENST00000581811 299 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 MTRNR2L2-201ENST00000604882 87 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 MIR6867-201ENST00000610636 67 ntBASIC4.62□□□□□ -1.67
RNF216Q9NWF9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF216Q9NWF9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RNF216Q9NWF9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 AL353746.1-201ENST00000566293 6881 ntBASIC4.61□□□□□ -1.67
RNF216Q9NWF9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 SNORA25.3-201ENST00000363205 127 ntBASIC4.61□□□□□ -1.67
RNF216Q9NWF9 RNU6-112P-201ENST00000363599 104 ntBASIC4.61□□□□□ -1.67
RNF216Q9NWF9 RNA5SP283-201ENST00000365604 119 ntBASIC4.61□□□□□ -1.67
RNF216Q9NWF9 MIR1179-201ENST00000408703 91 ntBASIC4.61□□□□□ -1.67
RNF216Q9NWF9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF216Q9NWF9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF216Q9NWF9 RNU4-88P-201ENST00000411220 86 ntBASIC4.6□□□□□ -1.67
RNF216Q9NWF9 ABCF2P2-201ENST00000450549 296 ntBASIC4.6□□□□□ -1.67
RNF216Q9NWF9 SCARNA21.1-201ENST00000515996 128 ntBASIC4.6□□□□□ -1.67
RNF216Q9NWF9 AC006064.5-201ENST00000541782 248 ntBASIC4.6□□□□□ -1.67
RNF216Q9NWF9 AL606490.9-201ENST00000603331 271 ntBASIC4.6□□□□□ -1.67
RNF216Q9NWF9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF216Q9NWF9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF216Q9NWF9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF216Q9NWF9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF216Q9NWF9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RNF216Q9NWF9 SNORA60-201ENST00000362396 134 ntBASIC4.59□□□□□ -1.67
RNF216Q9NWF9 RNU1-138P-201ENST00000384093 164 ntBASIC4.59□□□□□ -1.67
RNF216Q9NWF9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF216Q9NWF9 Y_RNA.588-201ENST00000391254 102 ntBASIC4.59□□□□□ -1.67
RNF216Q9NWF9 RNU6-1054P-201ENST00000411293 104 ntBASIC4.59□□□□□ -1.67
RNF216Q9NWF9 SNORD111.1-201ENST00000516421 86 ntBASIC4.59□□□□□ -1.67
RNF216Q9NWF9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF216Q9NWF9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF216Q9NWF9 MIR372-201ENST00000362225 67 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 RNU1-18P-201ENST00000363062 164 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 HMGN2P3-201ENST00000433603 273 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 HMGN2P5-201ENST00000436882 273 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 RPS29P19-201ENST00000479709 171 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 MIR514B-201ENST00000516774 80 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 MIR3938-201ENST00000582157 103 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 MIR432-201ENST00000606207 94 ntBASIC4.58□□□□□ -1.68
RNF216Q9NWF9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF216Q9NWF9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF216Q9NWF9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF216Q9NWF9 RNA5SP130-201ENST00000364431 114 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 MIR200C-201ENST00000384980 68 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 SNORD66.1-201ENST00000391230 76 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 RPL23AP83-201ENST00000434984 473 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 SNORA31.15-201ENST00000516771 132 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 MIR3920-201ENST00000581751 86 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 AC013244.2-201ENST00000603396 103 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 AC108206.1-201ENST00000570186 4159 ntBASIC4.57□□□□□ -1.68
RNF216Q9NWF9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF216Q9NWF9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF216Q9NWF9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF216Q9NWF9 SNORD46.1-201ENST00000364139 104 ntBASIC4.56□□□□□ -1.68
RNF216Q9NWF9 SNORA48.1-201ENST00000390879 135 ntBASIC4.56□□□□□ -1.68
RNF216Q9NWF9 RNU7-26P-201ENST00000458980 63 ntBASIC4.56□□□□□ -1.68
RNF216Q9NWF9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF216Q9NWF9 AP000942.3-201ENST00000603702 160 ntBASIC4.56□□□□□ -1.68
RNF216Q9NWF9 MIR6875-201ENST00000617506 72 ntBASIC4.56□□□□□ -1.68
RNF216Q9NWF9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
RNF216Q9NWF9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF216Q9NWF9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF216Q9NWF9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF216Q9NWF9 RNU6-525P-201ENST00000363685 104 ntBASIC4.55□□□□□ -1.68
RNF216Q9NWF9 DEFB122-202ENST00000569013 197 ntBASIC4.55□□□□□ -1.68
RNF216Q9NWF9 AL078603.1-201ENST00000603824 313 ntBASIC4.55□□□□□ -1.68
RNF216Q9NWF9 SNORA50A-202ENST00000629536 136 ntBASIC4.55□□□□□ -1.68
RNF216Q9NWF9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RNF216Q9NWF9 AL365361.1-201ENST00000566942 3481 ntBASIC4.54□□□□□ -1.68
RNF216Q9NWF9 Y_RNA.56-201ENST00000362798 112 ntBASIC4.54□□□□□ -1.68
RNF216Q9NWF9 AC083863.1-201ENST00000438811 231 ntBASIC4.54□□□□□ -1.68
RNF216Q9NWF9 AC015688.6-201ENST00000577737 104 ntBASIC4.54□□□□□ -1.68
RNF216Q9NWF9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RNF216Q9NWF9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.54□□□□□ -1.68
RNF216Q9NWF9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNF216Q9NWF9 MAPK10-362ENST00000641864 4484 ntBASIC4.53□□□□□ -1.68
RNF216Q9NWF9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF216Q9NWF9 MIR208A-201ENST00000362287 71 ntBASIC4.53□□□□□ -1.68
RNF216Q9NWF9 RNU6-1123P-201ENST00000362347 106 ntBASIC4.53□□□□□ -1.68
RNF216Q9NWF9 Y_RNA.258-201ENST00000364613 105 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms