Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
Q9N2K0 MIR1302-7-201ENST00000408841 72 ntBASIC0.93□□□□□ -2.26
Q9N2K0 RNU7-67P-201ENST00000459003 62 ntBASIC0.93□□□□□ -2.26
Q9N2K0 RNU7-53P-201ENST00000516705 60 ntBASIC0.93□□□□□ -2.26
Q9N2K0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.93□□□□□ -2.26
Q9N2K0 AC004817.2-201ENST00000561794 651 ntBASIC0.93□□□□□ -2.26
Q9N2K0 MIR4744-201ENST00000581563 82 ntBASIC0.93□□□□□ -2.26
Q9N2K0 AL353770.2-201ENST00000620024 78 ntBASIC0.93□□□□□ -2.26
Q9N2K0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Q9N2K0 Y_RNA.7-201ENST00000362352 102 ntBASIC0.92□□□□□ -2.26
Q9N2K0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.92□□□□□ -2.26
Q9N2K0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.92□□□□□ -2.26
Q9N2K0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.92□□□□□ -2.26
Q9N2K0 SNORA27-201ENST00000384323 126 ntBASIC0.92□□□□□ -2.26
Q9N2K0 Y_RNA.542-201ENST00000384641 111 ntBASIC0.92□□□□□ -2.26
Q9N2K0 MT-TN-201ENST00000387400 73 ntBASIC0.92□□□□□ -2.26
Q9N2K0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Q9N2K0 SNORD111-201ENST00000408139 94 ntBASIC0.92□□□□□ -2.26
Q9N2K0 RPS29P24-201ENST00000486345 171 ntBASIC0.92□□□□□ -2.26
Q9N2K0 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
Q9N2K0 SNORA18.4-201ENST00000516440 124 ntBASIC0.92□□□□□ -2.26
Q9N2K0 MIR548AO-201ENST00000579992 96 ntBASIC0.92□□□□□ -2.26
Q9N2K0 AC106800.4-201ENST00000614905 153 ntBASIC0.92□□□□□ -2.26
Q9N2K0 AC091895.1-201ENST00000624494 256 ntBASIC0.92□□□□□ -2.26
Q9N2K0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Q9N2K0 Y_RNA.118-201ENST00000363300 101 ntBASIC0.91□□□□□ -2.26
Q9N2K0 Y_RNA.144-201ENST00000363521 113 ntBASIC0.91□□□□□ -2.26
Q9N2K0 SNORD113.3-201ENST00000364630 78 ntBASIC0.91□□□□□ -2.26
Q9N2K0 RNU6-392P-201ENST00000364926 101 ntBASIC0.91□□□□□ -2.26
Q9N2K0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.91□□□□□ -2.26
Q9N2K0 Y_RNA.477-201ENST00000384352 108 ntBASIC0.91□□□□□ -2.26
Q9N2K0 Y_RNA.539-201ENST00000384635 107 ntBASIC0.91□□□□□ -2.26
Q9N2K0 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
Q9N2K0 RNU6-938P-201ENST00000411285 103 ntBASIC0.91□□□□□ -2.26
Q9N2K0 RNU7-73P-201ENST00000458743 63 ntBASIC0.91□□□□□ -2.26
Q9N2K0 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
Q9N2K0 MIR3128-201ENST00000581957 66 ntBASIC0.91□□□□□ -2.26
Q9N2K0 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
Q9N2K0 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
Q9N2K0 MIR6516-201ENST00000630554 81 ntBASIC0.91□□□□□ -2.26
Q9N2K0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Q9N2K0 MIR377-201ENST00000362145 69 ntBASIC0.9□□□□□ -2.27
Q9N2K0 RNY1-201ENST00000364228 113 ntBASIC0.9□□□□□ -2.27
Q9N2K0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.9□□□□□ -2.27
Q9N2K0 Y_RNA.626-201ENST00000411288 95 ntBASIC0.9□□□□□ -2.27
Q9N2K0 POLR2J4-204ENST00000418424 324 ntBASIC0.9□□□□□ -2.27
Q9N2K0 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
Q9N2K0 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
Q9N2K0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
Q9N2K0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.89□□□□□ -2.27
Q9N2K0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.89□□□□□ -2.27
Q9N2K0 RNU6-578P-201ENST00000390980 103 ntBASIC0.89□□□□□ -2.27
Q9N2K0 AF228730.3-201ENST00000436691 102 ntBASIC0.89□□□□□ -2.27
Q9N2K0 AL121914.1-201ENST00000450188 156 ntBASIC0.89□□□□□ -2.27
Q9N2K0 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
Q9N2K0 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
Q9N2K0 AC036111.3-201ENST00000526389 112 ntBASIC0.89□□□□□ -2.27
Q9N2K0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Q9N2K0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.89□□□□□ -2.27
Q9N2K0 AP000753.3-201ENST00000604083 169 ntBASIC0.89□□□□□ -2.27
Q9N2K0 MIR7111-201ENST00000619751 72 ntBASIC0.89□□□□□ -2.27
Q9N2K0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.88□□□□□ -2.27
Q9N2K0 AL035398.1-201ENST00000430869 322 ntBASIC0.88□□□□□ -2.27
Q9N2K0 Y_RNA.797-201ENST00000515977 94 ntBASIC0.88□□□□□ -2.27
Q9N2K0 SNORD36C-201ENST00000516733 66 ntBASIC0.88□□□□□ -2.27
Q9N2K0 RNU6-958P-201ENST00000516995 106 ntBASIC0.88□□□□□ -2.27
Q9N2K0 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
Q9N2K0 MIR4264-201ENST00000583520 66 ntBASIC0.88□□□□□ -2.27
Q9N2K0 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
Q9N2K0 AL365205.2-201ENST00000594586 68 ntBASIC0.88□□□□□ -2.27
Q9N2K0 Y_RNA.307-201ENST00000365022 117 ntBASIC0.87□□□□□ -2.27
Q9N2K0 RNU6-53P-201ENST00000365367 106 ntBASIC0.87□□□□□ -2.27
Q9N2K0 RNU6-1292P-201ENST00000383856 107 ntBASIC0.87□□□□□ -2.27
Q9N2K0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.87□□□□□ -2.27
Q9N2K0 Y_RNA.489-201ENST00000384410 101 ntBASIC0.87□□□□□ -2.27
Q9N2K0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.87□□□□□ -2.27
Q9N2K0 Y_RNA.508-201ENST00000384502 114 ntBASIC0.87□□□□□ -2.27
Q9N2K0 RNU6-493P-201ENST00000391321 108 ntBASIC0.87□□□□□ -2.27
Q9N2K0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.87□□□□□ -2.27
Q9N2K0 RNU6-998P-201ENST00000515894 101 ntBASIC0.87□□□□□ -2.27
Q9N2K0 SNORD116-25-201ENST00000516517 92 ntBASIC0.87□□□□□ -2.27
Q9N2K0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.87□□□□□ -2.27
Q9N2K0 RNU2-4P-201ENST00000606190 192 ntBASIC0.87□□□□□ -2.27
Q9N2K0 SNORD114-21-201ENST00000606412 72 ntBASIC0.87□□□□□ -2.27
Q9N2K0 AC108706.1-201ENST00000611053 297 ntBASIC0.87□□□□□ -2.27
Q9N2K0 AL136317.1-201ENST00000612653 226 ntBASIC0.87□□□□□ -2.27
Q9N2K0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
Q9N2K0 Y_RNA.23-201ENST00000362496 106 ntBASIC0.86□□□□□ -2.27
Q9N2K0 RNU6-654P-201ENST00000364373 107 ntBASIC0.86□□□□□ -2.27
Q9N2K0 RNU4-70P-201ENST00000384579 139 ntBASIC0.86□□□□□ -2.27
Q9N2K0 Y_RNA.571-201ENST00000384753 98 ntBASIC0.86□□□□□ -2.27
Q9N2K0 SNORD77.3-201ENST00000391113 65 ntBASIC0.86□□□□□ -2.27
Q9N2K0 MIR1276-201ENST00000408707 83 ntBASIC0.86□□□□□ -2.27
Q9N2K0 RNU6-994P-201ENST00000410507 111 ntBASIC0.86□□□□□ -2.27
Q9N2K0 Y_RNA.618-201ENST00000410949 107 ntBASIC0.86□□□□□ -2.27
Q9N2K0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.86□□□□□ -2.27
Q9N2K0 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
Q9N2K0 RNY3P16-201ENST00000516338 101 ntBASIC0.86□□□□□ -2.27
Q9N2K0 RNA5SP102-201ENST00000516865 106 ntBASIC0.86□□□□□ -2.27
Q9N2K0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms