Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 Y_RNA.20-201ENST00000362479 113 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 RNU6-888P-201ENST00000363010 101 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 SNORD115-28-201ENST00000363931 81 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 RNU1-36P-201ENST00000365130 165 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 SNORA51.10-201ENST00000384418 136 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 RNU6-125P-201ENST00000384505 107 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 SNORD12-201ENST00000391002 90 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 RNU6-1190P-201ENST00000410811 104 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.71□□□□□ -2.3
NANOGQ9H9S0 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.71□□□□□ -2.3
NANOGQ9H9S0 U6.104-201ENST00000637979 90 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
NANOGQ9H9S0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.7□□□□□ -2.3
NANOGQ9H9S0 RNA5SP48-201ENST00000363969 126 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.241-201ENST00000364470 117 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.350-201ENST00000365409 98 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 SNORD24-201ENST00000383884 75 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 SNORA24-201ENST00000384096 131 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.537-201ENST00000384626 109 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.626-201ENST00000411288 95 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 HMGN1P33-201ENST00000432945 451 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 AC023449.1-201ENST00000454464 154 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 RNU7-90P-201ENST00000459216 62 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 RNU6-1299P-201ENST00000516316 100 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.7□□□□□ -2.3
NANOGQ9H9S0 MIR151B-201ENST00000584249 96 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 AC108706.1-201ENST00000611053 297 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 uc_338.6-201ENST00000613544 171 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 MIR6788-201ENST00000618842 66 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 U4.1-201ENST00000620349 87 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 MIR6767-201ENST00000637302 66 ntBASIC0.7□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.262-201ENST00000364641 102 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 RNU4-17P-201ENST00000365598 141 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 MIR605-201ENST00000385078 83 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 SNORD77.3-201ENST00000391113 65 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 AC244023.1-201ENST00000426884 112 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 AL138752.1-201ENST00000452964 351 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 RNU6-365P-201ENST00000517113 106 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 AP003484.1-201ENST00000530974 250 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 MIR4662B-201ENST00000579498 81 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 MIR3149-201ENST00000584629 83 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 AC097639.2-201ENST00000603159 172 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 AC242498.1-201ENST00000604134 111 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 RNU2-4P-201ENST00000606190 192 ntBASIC0.69□□□□□ -2.3
NANOGQ9H9S0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.144-201ENST00000363521 113 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.452-201ENST00000384202 108 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 RNU6-196P-201ENST00000384315 107 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 MIR548H3-201ENST00000408771 118 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 RNU2-70P-201ENST00000410718 179 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 RNU6-847P-201ENST00000411115 108 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 AC015818.7-201ENST00000428754 109 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 AC087499.7-201ENST00000441958 109 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 RNU6-958P-201ENST00000516995 106 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 AP000942.4-201ENST00000604811 241 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 AL162730.1-201ENST00000605734 292 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
NANOGQ9H9S0 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 MIR373-201ENST00000362273 69 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-34-201ENST00000362441 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-369P-201ENST00000362515 102 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-12-201ENST00000362583 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-29-201ENST00000362834 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-9-201ENST00000362912 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-21-201ENST00000362963 81 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-14-201ENST00000363090 81 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-13-201ENST00000363358 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-41-201ENST00000363608 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-11-201ENST00000363616 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-5-201ENST00000363633 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-39-201ENST00000363694 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-4-201ENST00000363810 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-16-201ENST00000363887 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-6-201ENST00000363942 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-42-201ENST00000364273 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-15-201ENST00000364809 81 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-1-201ENST00000364961 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-702P-201ENST00000364982 107 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-26-201ENST00000365067 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-10-201ENST00000365073 81 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-43-201ENST00000365503 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 SNORD115-36-201ENST00000365629 82 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-47P-201ENST00000383866 107 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNY3P5-201ENST00000384127 102 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-463P-201ENST00000384340 107 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 Y_RNA.556-201ENST00000384677 113 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU6-205P-201ENST00000390858 107 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
NANOGQ9H9S0 RNU7-45P-201ENST00000459460 63 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 332.9 ms