Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SNORD38B-202ENST00000625943 69 ntBASIC0.34□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 MIR588-201ENST00000384900 83 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 MIR526A2-201ENST00000390198 65 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 SNORA53-201ENST00000391141 249 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 RPS29P24-201ENST00000486345 171 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 RNY3P15-201ENST00000516297 97 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 AC100767.1-201ENST00000528178 123 ntBASIC0.33□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 SNORD24-201ENST00000383884 75 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNU6-514P-201ENST00000384208 107 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNU6-602P-201ENST00000411155 105 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AC022028.1-201ENST00000412054 408 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AL138752.1-201ENST00000452964 351 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 MTND4LP30-201ENST00000454092 297 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AC131281.1-201ENST00000522984 164 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AL160413.1-201ENST00000622780 310 ntBASIC0.32□□□□□ -2.36
POLR1EQ9GZS1 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 RNU6-888P-201ENST00000363010 101 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 SNORA63C-201ENST00000364578 129 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 SNORA22B-201ENST00000383876 138 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.527-201ENST00000384573 102 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 AF228730.3-201ENST00000436691 102 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 MIR18B-201ENST00000454574 71 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 snoU13.2-201ENST00000459201 104 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 RNU7-53P-201ENST00000516705 60 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 RNU6-365P-201ENST00000517113 106 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 RNU6-988P-201ENST00000519081 107 ntBASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
POLR1EQ9GZS1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.138-201ENST00000363462 102 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 MIR125B2-201ENST00000385128 89 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 RNU6-679P-201ENST00000391003 106 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 MTND5P22-201ENST00000458380 195 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 RNU7-102P-201ENST00000458948 62 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 RNU7-185P-201ENST00000459215 60 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AP003733.2-201ENST00000529409 171 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AC113195.1-201ENST00000579952 141 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AC006006.1-201ENST00000603082 144 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AC037487.3-201ENST00000606668 112 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
POLR1EQ9GZS1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.128-201ENST00000363391 112 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.216-201ENST00000364205 93 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.276-201ENST00000364732 109 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 RNU6-211P-201ENST00000384047 107 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 MIR598-201ENST00000384868 97 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 MIR563-201ENST00000385080 79 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 SNORD100-201ENST00000408573 76 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 AL731563.1-201ENST00000442202 214 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 RNU2-11P-201ENST00000459191 187 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 AC090897.1-201ENST00000580909 226 ntBASIC0.29□□□□□ -2.36
POLR1EQ9GZS1 UBE2WP1-201ENST00000362030 340 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 RNY1-201ENST00000364228 113 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 MIR626-201ENST00000385032 94 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 AL117351.2-201ENST00000513571 157 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 SERF1AP1-201ENST00000514575 187 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 RNU6-998P-201ENST00000515894 101 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 RNU6-504P-201ENST00000516568 104 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 Y_RNA.711-201ENST00000516993 102 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 MIR5688-201ENST00000580619 83 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 AC134503.1-201ENST00000633048 54 ntBASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
POLR1EQ9GZS1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
POLR1EQ9GZS1 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
POLR1EQ9GZS1 MIR30D-201ENST00000362283 70 ntBASIC0.27□□□□□ -2.37
POLR1EQ9GZS1 Y_RNA.7-201ENST00000362352 102 ntBASIC0.27□□□□□ -2.37
POLR1EQ9GZS1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.27□□□□□ -2.37
POLR1EQ9GZS1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 245.4 ms