Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6-504P-201ENST00000516568 104 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 RNU6-126P-201ENST00000516685 103 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 RNU6-365P-201ENST00000517113 106 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 Y_RNA.720-201ENST00000517166 92 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 RMST_2.1-201ENST00000617263 136 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 MIR6740-201ENST00000618268 113 ntBASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.48□□□□□ -2.33
HDHD3Q9BSH5 RNY1P10-201ENST00000363268 113 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU1-93P-201ENST00000364704 169 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 Y_RNA.422-201ENST00000384054 114 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 MIR563-201ENST00000385080 79 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 SNORD77.3-201ENST00000391113 65 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU6-381P-201ENST00000391259 108 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU7-67P-201ENST00000459003 62 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RPS29P24-201ENST00000486345 171 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU6-635P-201ENST00000516651 102 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU6-958P-201ENST00000516995 106 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 RNU6-1270P-201ENST00000517128 108 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 AP000753.3-201ENST00000604083 169 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 AC020891.4-201ENST00000605745 93 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 AL365265.1-201ENST00000621045 234 ntBASIC0.47□□□□□ -2.33
HDHD3Q9BSH5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 MIR1-1-201ENST00000362147 71 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-934P-201ENST00000365154 107 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 SNORA1-201ENST00000384107 130 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.574-201ENST00000384766 95 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 SNORA26.6-201ENST00000391256 115 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AL606845.1-201ENST00000404881 255 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-602P-201ENST00000411155 105 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 SNORD83.1-201ENST00000411362 77 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 HMGN1P33-201ENST00000432945 451 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AC067940.1-201ENST00000458411 300 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AC107297.1-201ENST00000459991 176 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-998P-201ENST00000515894 101 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-1053P-201ENST00000515930 101 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-561P-201ENST00000516222 102 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AL442663.2-201ENST00000554385 511 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AL117187.1-201ENST00000555482 181 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AC133485.1-201ENST00000567176 124 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AC138907.6-201ENST00000568401 126 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.396-201ENST00000383949 103 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 RNU6-738P-201ENST00000384531 106 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 RNU6-1228P-201ENST00000391014 107 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 AC015818.7-201ENST00000428754 109 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 AC087499.7-201ENST00000441958 109 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 RNU7-56P-201ENST00000458744 62 ntBASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.461-201ENST00000384263 103 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 MIR573-201ENST00000384964 99 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 RNU4-43P-201ENST00000410628 137 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 RNU6-733P-201ENST00000410759 104 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.622-201ENST00000411091 108 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 AL603825.1-201ENST00000438481 80 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 snoU13.2-201ENST00000459201 104 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 RNU7-96P-201ENST00000459535 64 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 RNU6-237P-201ENST00000515985 71 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 CYP3A137P-201ENST00000562436 69 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 AC011195.1-201ENST00000578177 177 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.145-201ENST00000363527 102 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 RNY1P8-201ENST00000383970 114 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.416-201ENST00000384014 113 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 MIR606-201ENST00000384851 96 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 SNORD58.1-201ENST00000391313 66 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 AL358176.2-201ENST00000425769 204 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.638-201ENST00000459374 113 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 RNU7-53P-201ENST00000516705 60 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 MIR4676-201ENST00000583078 72 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.812-201ENST00000610788 101 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.784-201ENST00000613803 101 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.787-201ENST00000616522 101 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.780-201ENST00000617336 101 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.801-201ENST00000619005 101 ntBASIC0.43□□□□□ -2.34
HDHD3Q9BSH5 MIR30D-201ENST00000362283 70 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 RNU6-238P-201ENST00000363313 106 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 Y_RNA.352-201ENST00000365439 102 ntBASIC0.42□□□□□ -2.34
HDHD3Q9BSH5 RNU6-1189P-201ENST00000383958 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms