Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR2115-201ENST00000516657 100 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR4662B-201ENST00000579498 81 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR8055-201ENST00000610739 97 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 Y_RNA.802-201ENST00000614892 130 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR2909-201ENST00000617113 69 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 AC243994.1-201ENST00000618627 109 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR335-201ENST00000362173 94 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 MIR367-201ENST00000362299 68 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-34-201ENST00000362441 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-12-201ENST00000362583 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-29-201ENST00000362834 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.66-201ENST00000362862 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-9-201ENST00000362912 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-21-201ENST00000362963 81 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.82-201ENST00000363000 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.92-201ENST00000363043 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-14-201ENST00000363090 81 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-13-201ENST00000363358 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-41-201ENST00000363608 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-11-201ENST00000363616 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-5-201ENST00000363633 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-39-201ENST00000363694 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-4-201ENST00000363810 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-16-201ENST00000363887 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-6-201ENST00000363942 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-42-201ENST00000364273 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.229-201ENST00000364347 113 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.235-201ENST00000364412 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-15-201ENST00000364809 81 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-1-201ENST00000364961 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.306-201ENST00000365015 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-26-201ENST00000365067 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-10-201ENST00000365073 81 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.312-201ENST00000365089 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.322-201ENST00000365151 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNU6-396P-201ENST00000365369 105 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-43-201ENST00000365503 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-36-201ENST00000365629 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.376-201ENST00000365638 108 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 VTRNA1-3-201ENST00000365645 89 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNU6-514P-201ENST00000384208 107 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD61-201ENST00000384252 73 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 MIR802-201ENST00000390235 94 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 MIR1827-201ENST00000408549 66 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD99-201ENST00000408612 74 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNA5SP95-201ENST00000410319 137 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC113618.1-201ENST00000416747 285 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC244023.1-201ENST00000426884 112 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.650-201ENST00000459002 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXC2Q99958 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.777-201ENST00000516982 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC100767.1-201ENST00000528178 123 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 MIR4282-201ENST00000583613 67 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.771-201ENST00000598668 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC242498.1-201ENST00000604134 111 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SNORD115-40-201ENST00000606510 82 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 AC037487.3-201ENST00000606668 112 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 RNU6-94P-201ENST00000607728 107 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 Y_RNA.789-201ENST00000622480 102 ntBASIC0.48□□□□□ -2.33
FOXC2Q99958 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
FOXC2Q99958 Y_RNA.14-201ENST00000362415 103 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 Y_RNA.24-201ENST00000362508 103 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 RNU6-888P-201ENST00000363010 101 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 Y_RNA.117-201ENST00000363294 101 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 SNORD115-28-201ENST00000363931 81 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 RNU6-740P-201ENST00000364734 105 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 Y_RNA.293-201ENST00000364908 93 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 Y_RNA.326-201ENST00000365176 113 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 RNU6-484P-201ENST00000384016 107 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 MIR548F4-201ENST00000408515 105 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 RNU6-651P-201ENST00000411040 105 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 RNU2-55P-201ENST00000411146 174 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 AC090844.1-201ENST00000422019 156 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 AC023449.1-201ENST00000454464 154 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 snoU13.16-201ENST00000459350 104 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 AC097639.2-201ENST00000603159 172 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 AP000942.4-201ENST00000604811 241 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
FOXC2Q99958 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.46□□□□□ -2.34
FOXC2Q99958 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
FOXC2Q99958 Y_RNA.37-201ENST00000362606 108 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 Y_RNA.237-201ENST00000364439 102 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SNORA8.3-201ENST00000384679 139 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 MT-TW-201ENST00000387382 68 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SNORA40.5-201ENST00000391061 128 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SNRPGP8-201ENST00000454064 226 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 RNU7-73P-201ENST00000458743 63 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SCARNA8-201ENST00000515924 131 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SNORA18.4-201ENST00000516440 124 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 SCARNA24.2-201ENST00000516968 130 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.46□□□□□ -2.34
FOXC2Q99958 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 AL136317.1-201ENST00000612653 226 ntBASIC0.46□□□□□ -2.34
FOXC2Q99958 Y_RNA.44-201ENST00000362676 108 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 348.6 ms