Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 POLR2J4-204ENST00000418424 324 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 AL512326.2-201ENST00000426359 151 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 AC243994.1-201ENST00000618627 109 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 AP000648.3-201ENST00000623539 4507 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 RNU6-756P-201ENST00000383997 107 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 RNU6-203P-201ENST00000384038 104 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 RNU7-6P-201ENST00000516845 62 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 AC068339.1-201ENST00000526965 141 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 AC004812.1-201ENST00000540773 146 ntBASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PTCHD1Q96NR3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 RNU6-766P-201ENST00000362478 107 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.43-201ENST00000362670 111 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 U8.6-201ENST00000364939 135 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 SNORA51.5-201ENST00000384126 131 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.531-201ENST00000384589 121 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 RNU6-893P-201ENST00000458841 100 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 SNORA74.3-201ENST00000517108 154 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 MIR3152-201ENST00000579801 74 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 MIR4791-201ENST00000607666 84 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 AC106754.2-201ENST00000623006 233 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 AC064859.1-201ENST00000624741 174 ntBASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.328-201ENST00000365208 113 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RNA5SP261-201ENST00000410536 106 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RPL23AP6-201ENST00000446637 472 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RNU7-73P-201ENST00000458743 63 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RPS23P4-201ENST00000487908 423 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 MIR5009-201ENST00000578736 100 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 MIR3945-201ENST00000581853 98 ntBASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTCHD1Q96NR3 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.171-201ENST00000363760 102 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 SNORA70B-201ENST00000384210 135 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 RNU6-913P-201ENST00000390913 95 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 RNU7-113P-201ENST00000459273 62 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.677-201ENST00000516401 85 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 RNU6-537P-201ENST00000517277 103 ntBASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PTCHD1Q96NR3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 SNORA22.1-201ENST00000362701 134 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1113P-201ENST00000384348 107 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 MIR194-1-201ENST00000384892 85 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 SNORA26.6-201ENST00000391256 115 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.694-201ENST00000516677 117 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 AL020996.3-201ENST00000606617 222 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 AC095038.3-201ENST00000634439 195 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 AL162726.3-218ENST00000636401 95 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 MIR6841-201ENST00000637129 72 ntBASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1255P-201ENST00000363434 112 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 RNU7-43P-201ENST00000516554 64 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 RNU6-1258P-201ENST00000516911 111 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 DEFB122-202ENST00000569013 197 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 AC087741.2-201ENST00000619415 172 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 MIR6717-201ENST00000622747 73 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
PTCHD1Q96NR3 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 Y_RNA.299-201ENST00000364973 94 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 SNORA51.10-201ENST00000384418 136 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 RNA5SP212-201ENST00000391223 107 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 AL356320.1-201ENST00000429616 163 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 RPL39P25-201ENST00000449384 154 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 MIR4287-201ENST00000579398 78 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 AL513534.2-201ENST00000603836 250 ntBASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTCHD1Q96NR3 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 261.8 ms