Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
DNAAF1Q8NEP3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
DNAAF1Q8NEP3 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 Y_RNA.441-201ENST00000384123 112 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 MIR624-201ENST00000385217 97 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 AL591806.2-201ENST00000433122 173 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 AC108210.2-201ENST00000503681 201 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 RNU6-998P-201ENST00000515894 101 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 RNU6-182P-201ENST00000516970 105 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 RNU6-958P-201ENST00000516995 106 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 FTX_2.1-201ENST00000618816 94 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 MIR7843-201ENST00000622274 79 ntBASIC1.22□□□□□ -2.21
DNAAF1Q8NEP3 RNU6-913P-201ENST00000390913 95 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-239P-201ENST00000390990 99 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 PCNPP3-201ENST00000393579 471 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 RNA5SP127-201ENST00000411051 133 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-67P-201ENST00000459003 62 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-121P-201ENST00000516604 62 ntBASIC1.21□□□□□ -2.22
DNAAF1Q8NEP3 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 SNORA80D-201ENST00000384488 135 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-73P-201ENST00000458743 63 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-96P-201ENST00000459535 64 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 SCARNA15-202ENST00000516881 127 ntBASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
DNAAF1Q8NEP3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 SNORA25.7-201ENST00000364375 127 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 AL035398.1-201ENST00000430869 322 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 SEPT14P17-201ENST00000617978 177 ntBASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DNAAF1Q8NEP3 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 AC090844.1-201ENST00000422019 156 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 RNU2-11P-201ENST00000459191 187 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 MIR8055-201ENST00000610739 97 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 MIR6715A-201ENST00000615929 79 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 MIR6516-201ENST00000630554 81 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 MIR3658-201ENST00000636291 56 ntBASIC1.18□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.150-201ENST00000363562 102 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-654P-201ENST00000364373 107 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-886P-201ENST00000384319 105 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 RNU7-53P-201ENST00000516705 60 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 AC104984.5-201ENST00000586878 94 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 AL353997.5-201ENST00000618886 171 ntBASIC1.17□□□□□ -2.22
DNAAF1Q8NEP3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNU1-17P-201ENST00000363022 152 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 MIR222-201ENST00000384992 110 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-907P-201ENST00000390924 102 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 AL020996.3-201ENST00000606617 222 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 AC091932.4-201ENST00000623386 200 ntBASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
DNAAF1Q8NEP3 MIR342-201ENST00000362212 99 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 RNU6-125P-201ENST00000384505 107 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 SNORA75.5-201ENST00000391291 81 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 MIR548I3-201ENST00000408378 149 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 RNU6-394P-201ENST00000410735 107 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 snoU13.23-201ENST00000458863 104 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 MIR3646-201ENST00000578301 84 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 AC098479.1-201ENST00000609225 154 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 MTND5P32-201ENST00000560711 1802 ntBASIC1.15□□□□□ -2.23
DNAAF1Q8NEP3 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
DNAAF1Q8NEP3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.14□□□□□ -2.23
DNAAF1Q8NEP3 RNY1P11-201ENST00000363759 113 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms