Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 Y_RNA.440-201ENST00000384120 114 ntBASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 RNU6-554P-201ENST00000410466 106 ntBASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 STAG3L5P-204ENST00000443759 179 ntBASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 AC108729.3-201ENST00000513484 108 ntBASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIMC1Q8NDZ2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 Y_RNA.198-201ENST00000364013 98 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 MIR30A-201ENST00000385092 71 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 HSPE1P9-201ENST00000440046 311 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 AC025033.1-201ENST00000463883 194 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 RPS29P24-201ENST00000486345 171 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 SNORA31.10-201ENST00000516482 106 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 RNY4P20-201ENST00000516678 93 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 AP003484.1-201ENST00000530974 250 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 AC015726.2-201ENST00000620112 122 ntBASIC1.97□□□□□ -2.09
SIMC1Q8NDZ2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 MIRLET7C-201ENST00000362160 84 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 RNU1-133P-201ENST00000364867 167 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.351-201ENST00000365436 96 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 HMGN2P32-201ENST00000444648 269 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 AC087499.4-201ENST00000448505 178 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.694-201ENST00000516677 117 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 RNU7-70P-201ENST00000516941 66 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 AP000942.3-201ENST00000603702 160 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 AL035470.1-201ENST00000622571 220 ntBASIC1.96□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 RNY1P6-201ENST00000384193 109 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-163P-201ENST00000384396 106 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 MT-TI-201ENST00000387365 69 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SNORA18.7-201ENST00000516910 131 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 AC021443.1-201ENST00000604478 211 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 AC106754.2-201ENST00000623006 233 ntBASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SIMC1Q8NDZ2 SNORA63.5-201ENST00000363548 123 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.298-201ENST00000364960 107 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 snoU13.27-201ENST00000459278 104 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.677-201ENST00000516401 85 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-295P-201ENST00000516901 104 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 SUMO2P16-201ENST00000519475 264 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 MIR5582-201ENST00000579697 68 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 SNORA28-201ENST00000606769 126 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 MIR7111-201ENST00000619751 72 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SIMC1Q8NDZ2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNY4P6-201ENST00000363667 96 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.163-201ENST00000363702 113 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-1014P-201ENST00000383940 103 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 SNORD38C-201ENST00000384381 69 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 U8.17-201ENST00000391292 132 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU7-164P-201ENST00000459221 62 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU7-80P-201ENST00000459562 61 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-830P-201ENST00000516353 107 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-537P-201ENST00000517277 103 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AC006254.2-201ENST00000603259 279 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 HSPE1P19-201ENST00000603327 295 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AC103810.8-201ENST00000607347 118 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AC091932.4-201ENST00000623386 200 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AC027279.3-201ENST00000625055 122 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AL596211.1-201ENST00000569873 2277 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 AL589743.1-201ENST00000551932 2712 ntBASIC1.93□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-766P-201ENST00000362478 107 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.323-201ENST00000365157 109 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.328-201ENST00000365208 113 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-756P-201ENST00000383997 107 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 U8.16-201ENST00000391279 133 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 MIR1302-5-201ENST00000408164 150 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RPL39P34-201ENST00000477141 156 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RNU7-123P-201ENST00000515911 60 ntBASIC1.92□□□□□ -2.1
SIMC1Q8NDZ2 RNA5SP437-201ENST00000517249 129 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 288.1 ms