Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 snoU13.27-201ENST00000459278 104 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 RNU7-41P-201ENST00000515917 61 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 MIR3140-201ENST00000583685 90 ntBASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SAMD1Q6SPF0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 Y_RNA.239-201ENST00000364444 113 ntBASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 Y_RNA.606-201ENST00000410579 103 ntBASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 AC009474.2-201ENST00000451383 136 ntBASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 AC026403.1-201ENST00000518938 295 ntBASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 MIR3124-201ENST00000582636 67 ntBASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.45□□□□□ -1.7
SAMD1Q6SPF0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 RNU1-89P-201ENST00000384592 164 ntBASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 SNORA67.4-201ENST00000384688 142 ntBASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 RNU6-604P-201ENST00000390917 100 ntBASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 RNVU1-2-201ENST00000516326 135 ntBASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 MIR3922-201ENST00000585192 84 ntBASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
SAMD1Q6SPF0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SAMD1Q6SPF0 AL109933.3-201ENST00000619095 188 ntBASIC4.43□□□□□ -1.7
SAMD1Q6SPF0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.43□□□□□ -1.7
SAMD1Q6SPF0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 RNU6-829P-201ENST00000363700 112 ntBASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 MIR218-2-201ENST00000385006 110 ntBASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 RNU6-1194P-201ENST00000516208 104 ntBASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 MIR5089-201ENST00000580047 84 ntBASIC4.42□□□□□ -1.7
SAMD1Q6SPF0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 Y_RNA.236-201ENST00000364427 111 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 SNORA40.6-201ENST00000391153 128 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 RNA5SP208-201ENST00000516156 78 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 RNU6-531P-201ENST00000516694 104 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 RNU2-19P-201ENST00000517288 84 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 MIR3616-201ENST00000584070 92 ntBASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SAMD1Q6SPF0 MIR563-201ENST00000385080 79 ntBASIC4.4□□□□□ -1.71
SAMD1Q6SPF0 RPS27P16-201ENST00000425758 201 ntBASIC4.4□□□□□ -1.71
SAMD1Q6SPF0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SAMD1Q6SPF0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.4□□□□□ -1.71
SAMD1Q6SPF0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SAMD1Q6SPF0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 AC092185.1-201ENST00000491371 97 ntBASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 U3.45-201ENST00000607547 219 ntBASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SAMD1Q6SPF0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 AC104332.2-201ENST00000429959 156 ntBASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 MIR6740-201ENST00000618268 113 ntBASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.38□□□□□ -1.71
SAMD1Q6SPF0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 RNU1-91P-201ENST00000364746 163 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 HMGN2P35-201ENST00000412164 270 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 AL606490.4-201ENST00000423117 127 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 RNU11-2P-201ENST00000516898 142 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 PRELID3BP2-201ENST00000605362 201 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 DLEU2_3.2-201ENST00000612883 73 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 TRDV1-202ENST00000621643 102 ntBASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.37□□□□□ -1.71
SAMD1Q6SPF0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 MIR30D-201ENST00000362283 70 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 RNU7-195P-201ENST00000458793 62 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 AC097510.1-201ENST00000510945 133 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 RNA5SP481-201ENST00000516814 122 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 SNORA31.26-201ENST00000517250 137 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 U6.81-201ENST00000612550 106 ntBASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SAMD1Q6SPF0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 RNU4-58P-201ENST00000363192 141 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 RNU6-824P-201ENST00000363724 104 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 Z96811.1-201ENST00000445880 108 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 SNORA25.16-201ENST00000516741 121 ntBASIC4.35□□□□□ -1.71
SAMD1Q6SPF0 AC008011.1-201ENST00000545989 227 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms