Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 snoU13.23-201ENST00000458863 104 ntBASIC2.07□□□□□ -2.08
PTPN1P18031 RNU6-998P-201ENST00000515894 101 ntBASIC2.07□□□□□ -2.08
PTPN1P18031 MIR4769-201ENST00000584126 77 ntBASIC2.07□□□□□ -2.08
PTPN1P18031 AL670379.3-201ENST00000605040 251 ntBASIC2.07□□□□□ -2.08
PTPN1P18031 MIR6129-201ENST00000616087 109 ntBASIC2.07□□□□□ -2.08
PTPN1P18031 MTND5P18-201ENST00000445624 1801 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 Y_RNA.370-201ENST00000365589 108 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 RNU6-429P-201ENST00000384582 108 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 MIR548A3-201ENST00000385297 97 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 RNU2-40P-201ENST00000410833 196 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 RNA5SP136-201ENST00000410906 107 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 AL035461.1-201ENST00000421490 332 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 RNU6-237P-201ENST00000515985 71 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 FAM106DP-201ENST00000586416 501 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 AL121890.5-201ENST00000620848 304 ntBASIC2.06□□□□□ -2.08
PTPN1P18031 Y_RNA.528-201ENST00000384575 108 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 MIR194-1-201ENST00000384892 85 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 SNORD123-201ENST00000459473 70 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 AC015712.3-201ENST00000559380 164 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 AL773524.1-201ENST00000614065 229 ntBASIC2.05□□□□□ -2.08
PTPN1P18031 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTPN1P18031 MIR302B-201ENST00000362188 73 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 RNU6-414P-201ENST00000363705 104 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 SNORA70.7-201ENST00000384159 133 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 U8.13-201ENST00000390842 128 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 AL035398.1-201ENST00000430869 322 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 SUMO2P16-201ENST00000519475 264 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 AC021443.1-201ENST00000604478 211 ntBASIC2.04□□□□□ -2.08
PTPN1P18031 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PTPN1P18031 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PTPN1P18031 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTPN1P18031 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PTPN1P18031 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTPN1P18031 JTBP1-201ENST00000441314 247 ntBASIC2.03□□□□□ -2.08
PTPN1P18031 MIR548AR-201ENST00000582191 57 ntBASIC2.03□□□□□ -2.08
PTPN1P18031 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
PTPN1P18031 AC106754.2-201ENST00000623006 233 ntBASIC2.03□□□□□ -2.08
PTPN1P18031 AC095038.3-201ENST00000634439 195 ntBASIC2.03□□□□□ -2.08
PTPN1P18031 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTPN1P18031 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PTPN1P18031 RNU6-44P-201ENST00000384045 107 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PTPN1P18031 SNORD28B-201ENST00000390993 75 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 Y_RNA.649-201ENST00000459077 103 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 RNU2-11P-201ENST00000459191 187 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 COX6CP6-201ENST00000490840 228 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 AC108210.2-201ENST00000503681 201 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 HSPE1P19-201ENST00000603327 295 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
PTPN1P18031 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PTPN1P18031 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PTPN1P18031 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNU4-16P-201ENST00000364737 141 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 SNORD116-21-201ENST00000384507 92 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 SNORA40.18-201ENST00000391200 128 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 AL161935.2-201ENST00000414627 60 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNU7-67P-201ENST00000459003 62 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNU2-13P-201ENST00000515909 113 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNU6-917P-201ENST00000516294 104 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 RNY4P20-201ENST00000516678 93 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 SNORA74.3-201ENST00000517108 154 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
PTPN1P18031 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
PTPN1P18031 Y_RNA.298-201ENST00000364960 107 ntBASIC2□□□□□ -2.09
PTPN1P18031 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
PTPN1P18031 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
PTPN1P18031 RPS29P29-201ENST00000456396 171 ntBASIC2□□□□□ -2.09
PTPN1P18031 RNU7-164P-201ENST00000459221 62 ntBASIC2□□□□□ -2.09
PTPN1P18031 SNORA31.4-201ENST00000516049 129 ntBASIC2□□□□□ -2.09
PTPN1P18031 RNU7-53P-201ENST00000516705 60 ntBASIC2□□□□□ -2.09
PTPN1P18031 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
PTPN1P18031 Y_RNA.709-201ENST00000516952 92 ntBASIC2□□□□□ -2.09
PTPN1P18031 RNU6-958P-201ENST00000516995 106 ntBASIC2□□□□□ -2.09
PTPN1P18031 MIR3683-201ENST00000580847 82 ntBASIC2□□□□□ -2.09
PTPN1P18031 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
PTPN1P18031 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
PTPN1P18031 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2□□□□□ -2.09
PTPN1P18031 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
PTPN1P18031 SNORA24-201ENST00000384096 131 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 RNU6-1067P-201ENST00000384752 107 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 MIR548A1-201ENST00000385041 97 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PTPN1P18031 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.99□□□□□ -2.09
PTPN1P18031 RNU6-589P-201ENST00000516485 107 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 204.7 ms