Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RNU6-1190P-201ENST00000410811 104 ntBASIC3.88□□□□□ -1.79
CHGAP10645 SNORD3E-202ENST00000627253 216 ntBASIC3.88□□□□□ -1.79
CHGAP10645 AL512310.12-203ENST00000640543 90 ntBASIC3.88□□□□□ -1.79
CHGAP10645 RNU6-1313P-201ENST00000362622 102 ntBASIC3.87□□□□□ -1.79
CHGAP10645 SNORA67.4-201ENST00000384688 142 ntBASIC3.87□□□□□ -1.79
CHGAP10645 Y_RNA.659-201ENST00000515994 113 ntBASIC3.87□□□□□ -1.79
CHGAP10645 RNU6-162P-201ENST00000516228 103 ntBASIC3.87□□□□□ -1.79
CHGAP10645 RNA5SP24-201ENST00000516478 95 ntBASIC3.87□□□□□ -1.79
CHGAP10645 MIR548Z-201ENST00000584743 97 ntBASIC3.87□□□□□ -1.79
CHGAP10645 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHGAP10645 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHGAP10645 SNORD56.5-201ENST00000364281 72 ntBASIC3.86□□□□□ -1.79
CHGAP10645 SNORD114-30-201ENST00000364448 72 ntBASIC3.86□□□□□ -1.79
CHGAP10645 SNORD78.1-201ENST00000390866 65 ntBASIC3.86□□□□□ -1.79
CHGAP10645 RNA5SP501-201ENST00000410990 112 ntBASIC3.86□□□□□ -1.79
CHGAP10645 AC099513.1-201ENST00000490423 301 ntBASIC3.86□□□□□ -1.79
CHGAP10645 Y_RNA.705-201ENST00000516862 110 ntBASIC3.86□□□□□ -1.79
CHGAP10645 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.86□□□□□ -1.79
CHGAP10645 IGLL4P-201ENST00000614590 133 ntBASIC3.86□□□□□ -1.79
CHGAP10645 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.86□□□□□ -1.79
CHGAP10645 snoU13.16-201ENST00000459350 104 ntBASIC3.85□□□□□ -1.79
CHGAP10645 Y_RNA.676-201ENST00000516393 96 ntBASIC3.85□□□□□ -1.79
CHGAP10645 RNU6-56P-201ENST00000516986 93 ntBASIC3.85□□□□□ -1.79
CHGAP10645 MIR4439-201ENST00000583746 80 ntBASIC3.85□□□□□ -1.79
CHGAP10645 AC091304.10-201ENST00000641554 121 ntBASIC3.85□□□□□ -1.79
CHGAP10645 MIR424-201ENST00000362227 98 ntBASIC3.84□□□□□ -1.79
CHGAP10645 RNA5SP289-201ENST00000362332 137 ntBASIC3.84□□□□□ -1.79
CHGAP10645 U8.2-201ENST00000363156 134 ntBASIC3.84□□□□□ -1.79
CHGAP10645 RNY1P1-201ENST00000364372 112 ntBASIC3.84□□□□□ -1.79
CHGAP10645 RNU1-51P-201ENST00000365345 176 ntBASIC3.84□□□□□ -1.79
CHGAP10645 RNU6-972P-201ENST00000391208 107 ntBASIC3.84□□□□□ -1.79
CHGAP10645 U1.36-201ENST00000620684 176 ntBASIC3.84□□□□□ -1.79
CHGAP10645 SNORA1.1-201ENST00000364671 133 ntBASIC3.83□□□□□ -1.8
CHGAP10645 SNORA32-201ENST00000384072 121 ntBASIC3.83□□□□□ -1.8
CHGAP10645 AC109327.2-201ENST00000448339 378 ntBASIC3.83□□□□□ -1.8
CHGAP10645 snoU13.15-201ENST00000459407 104 ntBASIC3.83□□□□□ -1.8
CHGAP10645 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.83□□□□□ -1.8
CHGAP10645 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.83□□□□□ -1.8
CHGAP10645 MIR26A1-201ENST00000362205 77 ntBASIC3.82□□□□□ -1.8
CHGAP10645 SNORD115-35-201ENST00000365122 82 ntBASIC3.82□□□□□ -1.8
CHGAP10645 SNORA3.2-201ENST00000408221 125 ntBASIC3.82□□□□□ -1.8
CHGAP10645 RNU6-887P-201ENST00000410660 100 ntBASIC3.82□□□□□ -1.8
CHGAP10645 BTF3P4-201ENST00000418852 495 ntBASIC3.82□□□□□ -1.8
CHGAP10645 RPL23AP6-201ENST00000446637 472 ntBASIC3.82□□□□□ -1.8
CHGAP10645 SNORA74.3-201ENST00000517108 154 ntBASIC3.82□□□□□ -1.8
CHGAP10645 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.82□□□□□ -1.8
CHGAP10645 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CHGAP10645 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CHGAP10645 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CHGAP10645 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.81□□□□□ -1.8
CHGAP10645 AC108729.3-201ENST00000513484 108 ntBASIC3.81□□□□□ -1.8
CHGAP10645 FAM106DP-201ENST00000586416 501 ntBASIC3.81□□□□□ -1.8
CHGAP10645 MIR8055-201ENST00000610739 97 ntBASIC3.81□□□□□ -1.8
CHGAP10645 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.81□□□□□ -1.8
CHGAP10645 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHGAP10645 Y_RNA.354-201ENST00000365448 111 ntBASIC3.8□□□□□ -1.8
CHGAP10645 RPS27P29-201ENST00000463110 252 ntBASIC3.8□□□□□ -1.8
CHGAP10645 MIR4658-201ENST00000584344 65 ntBASIC3.8□□□□□ -1.8
CHGAP10645 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHGAP10645 SNORD116-22-201ENST00000384430 92 ntBASIC3.79□□□□□ -1.8
CHGAP10645 RN7SL75P-201ENST00000461926 281 ntBASIC3.79□□□□□ -1.8
CHGAP10645 RNA5SP320-201ENST00000516263 124 ntBASIC3.79□□□□□ -1.8
CHGAP10645 MIR4635-201ENST00000583759 79 ntBASIC3.79□□□□□ -1.8
CHGAP10645 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.79□□□□□ -1.8
CHGAP10645 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHGAP10645 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.78□□□□□ -1.8
CHGAP10645 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.78□□□□□ -1.8
CHGAP10645 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.78□□□□□ -1.8
CHGAP10645 RNU2-40P-201ENST00000410833 196 ntBASIC3.78□□□□□ -1.8
CHGAP10645 AC022137.1-201ENST00000483735 151 ntBASIC3.78□□□□□ -1.8
CHGAP10645 RNU7-2P-201ENST00000516096 62 ntBASIC3.78□□□□□ -1.8
CHGAP10645 RNU7-43P-201ENST00000516554 64 ntBASIC3.78□□□□□ -1.8
CHGAP10645 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.78□□□□□ -1.8
CHGAP10645 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
CHGAP10645 ZNF658B-202ENST00000615961 3375 ntBASIC3.77□□□□□ -1.81
CHGAP10645 RNU6-805P-201ENST00000365643 106 ntBASIC3.77□□□□□ -1.81
CHGAP10645 RNU6-675P-201ENST00000384236 104 ntBASIC3.77□□□□□ -1.81
CHGAP10645 Y_RNA.467-201ENST00000384297 102 ntBASIC3.77□□□□□ -1.81
CHGAP10645 Z98742.3-201ENST00000418637 326 ntBASIC3.77□□□□□ -1.81
CHGAP10645 HMGN1P33-201ENST00000432945 451 ntBASIC3.77□□□□□ -1.81
CHGAP10645 RPS29P6-201ENST00000438196 145 ntBASIC3.77□□□□□ -1.81
CHGAP10645 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHGAP10645 AP000648.3-201ENST00000623539 4507 ntBASIC3.76□□□□□ -1.81
CHGAP10645 Y_RNA.190-201ENST00000363964 101 ntBASIC3.76□□□□□ -1.81
CHGAP10645 RNU6-242P-201ENST00000384359 107 ntBASIC3.76□□□□□ -1.81
CHGAP10645 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.76□□□□□ -1.81
CHGAP10645 AL603825.1-201ENST00000438481 80 ntBASIC3.76□□□□□ -1.81
CHGAP10645 snoU13.23-201ENST00000458863 104 ntBASIC3.76□□□□□ -1.81
CHGAP10645 AC245166.1-201ENST00000521012 253 ntBASIC3.76□□□□□ -1.81
CHGAP10645 MIR3202-2-201ENST00000635980 79 ntBASIC3.76□□□□□ -1.81
CHGAP10645 AL161431.1-201ENST00000618966 4205 ntBASIC3.75□□□□□ -1.81
CHGAP10645 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.75□□□□□ -1.81
CHGAP10645 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CHGAP10645 MIR148B-201ENST00000362252 99 ntBASIC3.75□□□□□ -1.81
CHGAP10645 RNU6-457P-201ENST00000363999 107 ntBASIC3.75□□□□□ -1.81
CHGAP10645 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.75□□□□□ -1.81
CHGAP10645 RNA5SP270-201ENST00000411361 118 ntBASIC3.75□□□□□ -1.81
CHGAP10645 AC245047.7-201ENST00000440265 293 ntBASIC3.75□□□□□ -1.81
CHGAP10645 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CHGAP10645 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms