Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-126P-201ENST00000516685 103 ntBASIC1.43□□□□□ -2.18
MMP3P08254 MTND5P41-201ENST00000517498 206 ntBASIC1.43□□□□□ -2.18
MMP3P08254 MIR548AR-201ENST00000582191 57 ntBASIC1.43□□□□□ -2.18
MMP3P08254 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MMP3P08254 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MMP3P08254 RNU6-1082P-201ENST00000364574 107 ntBASIC1.42□□□□□ -2.18
MMP3P08254 SNORD77.3-201ENST00000391113 65 ntBASIC1.42□□□□□ -2.18
MMP3P08254 MIR548I3-201ENST00000408378 149 ntBASIC1.42□□□□□ -2.18
MMP3P08254 MIR548I1-201ENST00000408810 149 ntBASIC1.42□□□□□ -2.18
MMP3P08254 SNORA74.3-201ENST00000517108 154 ntBASIC1.42□□□□□ -2.18
MMP3P08254 AL442644.1-201ENST00000454390 3105 ntBASIC1.42□□□□□ -2.18
MMP3P08254 RNY1P11-201ENST00000363759 113 ntBASIC1.41□□□□□ -2.18
MMP3P08254 Y_RNA.180-201ENST00000363867 113 ntBASIC1.41□□□□□ -2.18
MMP3P08254 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
MMP3P08254 Y_RNA.337-201ENST00000365312 102 ntBASIC1.41□□□□□ -2.18
MMP3P08254 Y_RNA.393-201ENST00000383936 102 ntBASIC1.41□□□□□ -2.18
MMP3P08254 MIR7-2-201ENST00000384970 110 ntBASIC1.41□□□□□ -2.18
MMP3P08254 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.41□□□□□ -2.18
MMP3P08254 RNU6-830P-201ENST00000516353 107 ntBASIC1.41□□□□□ -2.18
MMP3P08254 MIR3144-201ENST00000579460 79 ntBASIC1.41□□□□□ -2.18
MMP3P08254 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
MMP3P08254 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
MMP3P08254 SNORD37.2-201ENST00000391075 66 ntBASIC1.4□□□□□ -2.19
MMP3P08254 RNU6-588P-201ENST00000410281 105 ntBASIC1.4□□□□□ -2.19
MMP3P08254 RNU6-394P-201ENST00000410735 107 ntBASIC1.4□□□□□ -2.19
MMP3P08254 RNU7-41P-201ENST00000515917 61 ntBASIC1.4□□□□□ -2.19
MMP3P08254 RNU6-255P-201ENST00000516957 105 ntBASIC1.4□□□□□ -2.19
MMP3P08254 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
MMP3P08254 AP003484.1-201ENST00000530974 250 ntBASIC1.4□□□□□ -2.19
MMP3P08254 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
MMP3P08254 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
MMP3P08254 AL513534.2-201ENST00000603836 250 ntBASIC1.4□□□□□ -2.19
MMP3P08254 AL096861.1-201ENST00000610899 123 ntBASIC1.4□□□□□ -2.19
MMP3P08254 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.4□□□□□ -2.19
MMP3P08254 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.4□□□□□ -2.19
MMP3P08254 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
MMP3P08254 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
MMP3P08254 RNU6-151P-201ENST00000364158 107 ntBASIC1.39□□□□□ -2.19
MMP3P08254 RNU4-11P-201ENST00000365287 132 ntBASIC1.39□□□□□ -2.19
MMP3P08254 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
MMP3P08254 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
MMP3P08254 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
MMP3P08254 SNORA18.4-201ENST00000516440 124 ntBASIC1.39□□□□□ -2.19
MMP3P08254 MIR4764-201ENST00000580680 88 ntBASIC1.39□□□□□ -2.19
MMP3P08254 AL365205.2-201ENST00000594586 68 ntBASIC1.39□□□□□ -2.19
MMP3P08254 GHRLOS.1-201ENST00000610995 70 ntBASIC1.39□□□□□ -2.19
MMP3P08254 AC134878.1-201ENST00000619901 243 ntBASIC1.39□□□□□ -2.19
MMP3P08254 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.39□□□□□ -2.19
MMP3P08254 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
MMP3P08254 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
MMP3P08254 MIR342-201ENST00000362212 99 ntBASIC1.38□□□□□ -2.19
MMP3P08254 SNORA25.7-201ENST00000364375 127 ntBASIC1.38□□□□□ -2.19
MMP3P08254 Y_RNA.370-201ENST00000365589 108 ntBASIC1.38□□□□□ -2.19
MMP3P08254 RNU6-449P-201ENST00000383914 107 ntBASIC1.38□□□□□ -2.19
MMP3P08254 RNU6-1189P-201ENST00000383958 107 ntBASIC1.38□□□□□ -2.19
MMP3P08254 Y_RNA.540-201ENST00000384638 111 ntBASIC1.38□□□□□ -2.19
MMP3P08254 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
MMP3P08254 RNU7-121P-201ENST00000516604 62 ntBASIC1.38□□□□□ -2.19
MMP3P08254 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
MMP3P08254 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.38□□□□□ -2.19
MMP3P08254 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
MMP3P08254 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
MMP3P08254 MIR3664-201ENST00000579074 99 ntBASIC1.38□□□□□ -2.19
MMP3P08254 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
MMP3P08254 DNAJC19P2-201ENST00000593340 302 ntBASIC1.38□□□□□ -2.19
MMP3P08254 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
MMP3P08254 MIR6844-201ENST00000637122 62 ntBASIC1.38□□□□□ -2.19
MMP3P08254 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MMP3P08254 SNORD33-201ENST00000362761 85 ntBASIC1.37□□□□□ -2.19
MMP3P08254 Y_RNA.170-201ENST00000363746 110 ntBASIC1.37□□□□□ -2.19
MMP3P08254 SNORD114-27-201ENST00000363766 70 ntBASIC1.37□□□□□ -2.19
MMP3P08254 RNU1-93P-201ENST00000364704 169 ntBASIC1.37□□□□□ -2.19
MMP3P08254 RNU6-597P-201ENST00000365620 102 ntBASIC1.37□□□□□ -2.19
MMP3P08254 Y_RNA.542-201ENST00000384641 111 ntBASIC1.37□□□□□ -2.19
MMP3P08254 MIR613-201ENST00000385248 95 ntBASIC1.37□□□□□ -2.19
MMP3P08254 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
MMP3P08254 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
MMP3P08254 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
MMP3P08254 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
MMP3P08254 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
MMP3P08254 snoU13.25-201ENST00000458945 104 ntBASIC1.37□□□□□ -2.19
MMP3P08254 RPS26P48-201ENST00000491713 339 ntBASIC1.37□□□□□ -2.19
MMP3P08254 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
MMP3P08254 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MMP3P08254 MTND5P32-201ENST00000560711 1802 ntBASIC1.37□□□□□ -2.19
MMP3P08254 SNORA25.3-201ENST00000363205 127 ntBASIC1.36□□□□□ -2.19
MMP3P08254 RNA5SP127-201ENST00000411051 133 ntBASIC1.36□□□□□ -2.19
MMP3P08254 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
MMP3P08254 MIR5197-201ENST00000583721 112 ntBASIC1.36□□□□□ -2.19
MMP3P08254 Y_RNA.778-201ENST00000620203 90 ntBASIC1.36□□□□□ -2.19
MMP3P08254 RNU6-774P-201ENST00000363238 107 ntBASIC1.35□□□□□ -2.19
MMP3P08254 Y_RNA.440-201ENST00000384120 114 ntBASIC1.35□□□□□ -2.19
MMP3P08254 MIR520E-201ENST00000384867 87 ntBASIC1.35□□□□□ -2.19
MMP3P08254 SNORA75.5-201ENST00000391291 81 ntBASIC1.35□□□□□ -2.19
MMP3P08254 AC087499.4-201ENST00000448505 178 ntBASIC1.35□□□□□ -2.19
MMP3P08254 RNA5SP272-201ENST00000516095 111 ntBASIC1.35□□□□□ -2.19
MMP3P08254 RNU6-346P-201ENST00000516288 111 ntBASIC1.35□□□□□ -2.19
MMP3P08254 RNU7-43P-201ENST00000516554 64 ntBASIC1.35□□□□□ -2.19
MMP3P08254 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
MMP3P08254 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms