Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
SYPP08247 RNU6-905P-201ENST00000384434 107 ntBASIC2.31□□□□□ -2.04
SYPP08247 AC107297.1-201ENST00000459991 176 ntBASIC2.31□□□□□ -2.04
SYPP08247 AP001318.4-201ENST00000616637 121 ntBASIC2.31□□□□□ -2.04
SYPP08247 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
SYPP08247 Y_RNA.370-201ENST00000365589 108 ntBASIC2.3□□□□□ -2.04
SYPP08247 MIR526A1-201ENST00000384897 85 ntBASIC2.3□□□□□ -2.04
SYPP08247 AL022718.1-201ENST00000412004 84 ntBASIC2.3□□□□□ -2.04
SYPP08247 POLR2J4-204ENST00000418424 324 ntBASIC2.3□□□□□ -2.04
SYPP08247 AL512326.2-201ENST00000426359 151 ntBASIC2.3□□□□□ -2.04
SYPP08247 PGBD4P5-201ENST00000445958 426 ntBASIC2.3□□□□□ -2.04
SYPP08247 RNU2-13P-201ENST00000515909 113 ntBASIC2.3□□□□□ -2.04
SYPP08247 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
SYPP08247 AC006254.2-201ENST00000603259 279 ntBASIC2.3□□□□□ -2.04
SYPP08247 AL353997.5-201ENST00000618886 171 ntBASIC2.3□□□□□ -2.04
SYPP08247 U1.36-201ENST00000620684 176 ntBASIC2.3□□□□□ -2.04
SYPP08247 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
SYPP08247 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SYPP08247 RNU6-640P-201ENST00000363693 105 ntBASIC2.29□□□□□ -2.04
SYPP08247 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNU6-1113P-201ENST00000384348 107 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNA5SP100-201ENST00000410903 110 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNA5SP59-201ENST00000410922 110 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
SYPP08247 RNU7-45P-201ENST00000459460 63 ntBASIC2.29□□□□□ -2.04
SYPP08247 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.29□□□□□ -2.04
SYPP08247 SNORA31.25-201ENST00000517242 134 ntBASIC2.29□□□□□ -2.04
SYPP08247 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.29□□□□□ -2.04
SYPP08247 AC004812.1-201ENST00000540773 146 ntBASIC2.29□□□□□ -2.04
SYPP08247 MIR5007-201ENST00000583098 95 ntBASIC2.29□□□□□ -2.04
SYPP08247 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.29□□□□□ -2.04
SYPP08247 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.29□□□□□ -2.04
SYPP08247 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SYPP08247 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SYPP08247 MIR424-201ENST00000362227 98 ntBASIC2.28□□□□□ -2.04
SYPP08247 Y_RNA.369-201ENST00000365568 117 ntBASIC2.28□□□□□ -2.04
SYPP08247 SNORA24-201ENST00000384096 131 ntBASIC2.28□□□□□ -2.04
SYPP08247 SNORA70.7-201ENST00000384159 133 ntBASIC2.28□□□□□ -2.04
SYPP08247 SNORA51.10-201ENST00000384418 136 ntBASIC2.28□□□□□ -2.04
SYPP08247 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.28□□□□□ -2.04
SYPP08247 SNORD123-201ENST00000459473 70 ntBASIC2.28□□□□□ -2.04
SYPP08247 RPS23P4-201ENST00000487908 423 ntBASIC2.28□□□□□ -2.04
SYPP08247 RNA5SP458-201ENST00000516188 119 ntBASIC2.28□□□□□ -2.04
SYPP08247 RNU7-6P-201ENST00000516845 62 ntBASIC2.28□□□□□ -2.04
SYPP08247 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.28□□□□□ -2.04
SYPP08247 SNORD3E-202ENST00000627253 216 ntBASIC2.28□□□□□ -2.04
SYPP08247 AL162726.3-218ENST00000636401 95 ntBASIC2.28□□□□□ -2.04
SYPP08247 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYPP08247 RNA5SP99-201ENST00000364020 114 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SYPP08247 Y_RNA.531-201ENST00000384589 121 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNU6-1319P-201ENST00000390855 104 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNU6-747P-201ENST00000390928 104 ntBASIC2.27□□□□□ -2.05
SYPP08247 SNORD28B-201ENST00000390993 75 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNU6-241P-201ENST00000391148 104 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNY4P30-201ENST00000410216 95 ntBASIC2.27□□□□□ -2.05
SYPP08247 RNU6-177P-201ENST00000411257 104 ntBASIC2.27□□□□□ -2.05
SYPP08247 AL603825.1-201ENST00000438481 80 ntBASIC2.27□□□□□ -2.05
SYPP08247 RPS29P29-201ENST00000456396 171 ntBASIC2.27□□□□□ -2.05
SYPP08247 MIR548AR-201ENST00000582191 57 ntBASIC2.27□□□□□ -2.05
SYPP08247 AL049779.4-201ENST00000604500 156 ntBASIC2.27□□□□□ -2.05
SYPP08247 AC087741.2-201ENST00000619415 172 ntBASIC2.27□□□□□ -2.05
SYPP08247 MIR219B-201ENST00000637023 88 ntBASIC2.27□□□□□ -2.05
SYPP08247 Y_RNA.78-201ENST00000362970 110 ntBASIC2.26□□□□□ -2.05
SYPP08247 SNORA19.1-201ENST00000410656 129 ntBASIC2.26□□□□□ -2.05
SYPP08247 RNU7-67P-201ENST00000459003 62 ntBASIC2.26□□□□□ -2.05
SYPP08247 Y_RNA.676-201ENST00000516393 96 ntBASIC2.26□□□□□ -2.05
SYPP08247 RNU7-53P-201ENST00000516705 60 ntBASIC2.26□□□□□ -2.05
SYPP08247 RNU6-958P-201ENST00000516995 106 ntBASIC2.26□□□□□ -2.05
SYPP08247 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
SYPP08247 AC095038.3-201ENST00000634439 195 ntBASIC2.26□□□□□ -2.05
SYPP08247 RNU6-661P-201ENST00000362409 107 ntBASIC2.25□□□□□ -2.05
SYPP08247 Y_RNA.544-201ENST00000384650 113 ntBASIC2.25□□□□□ -2.05
SYPP08247 MIR590-201ENST00000385008 97 ntBASIC2.25□□□□□ -2.05
SYPP08247 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
SYPP08247 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
SYPP08247 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
SYPP08247 RNU6-1258P-201ENST00000516911 111 ntBASIC2.25□□□□□ -2.05
SYPP08247 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
SYPP08247 MIR6841-201ENST00000637129 72 ntBASIC2.25□□□□□ -2.05
SYPP08247 Y_RNA.171-201ENST00000363760 102 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU6-816P-201ENST00000390914 107 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU6-1268P-201ENST00000391214 107 ntBASIC2.24□□□□□ -2.05
SYPP08247 SNORA26.6-201ENST00000391256 115 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU6-1239P-201ENST00000391310 107 ntBASIC2.24□□□□□ -2.05
SYPP08247 MIR1912-201ENST00000410389 80 ntBASIC2.24□□□□□ -2.05
SYPP08247 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.24□□□□□ -2.05
SYPP08247 RPL39P25-201ENST00000449384 154 ntBASIC2.24□□□□□ -2.05
SYPP08247 AC011753.1-201ENST00000451001 220 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU7-73P-201ENST00000458743 63 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU6-893P-201ENST00000458841 100 ntBASIC2.24□□□□□ -2.05
SYPP08247 RNU6-904P-201ENST00000516206 101 ntBASIC2.24□□□□□ -2.05
SYPP08247 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
SYPP08247 AC243994.1-201ENST00000618627 109 ntBASIC2.24□□□□□ -2.05
SYPP08247 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
SYPP08247 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.24□□□□□ -2.05
SYPP08247 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SYPP08247 SNORD115-19-201ENST00000363098 82 ntBASIC2.23□□□□□ -2.05
SYPP08247 SNORD115-18-201ENST00000363293 82 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms