Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.67□□□□□ -2.3
LCMT2O60294 MIR4643-201ENST00000577473 78 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.771-201ENST00000598668 102 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 AC008737.2-201ENST00000599446 118 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 SNORD115-40-201ENST00000606510 82 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.812-201ENST00000610788 101 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.784-201ENST00000613803 101 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.787-201ENST00000616522 101 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.780-201ENST00000617336 101 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.801-201ENST00000619005 101 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.789-201ENST00000622480 102 ntBASIC0.67□□□□□ -2.3
LCMT2O60294 Y_RNA.66-201ENST00000362862 102 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 Y_RNA.168-201ENST00000363740 102 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-694P-201ENST00000364071 147 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 Y_RNA.396-201ENST00000383949 103 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-484P-201ENST00000384016 107 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-994P-201ENST00000410507 111 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 Y_RNA.622-201ENST00000411091 108 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 SNRPGP8-201ENST00000454064 226 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU7-67P-201ENST00000459003 62 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 U7.7-201ENST00000459276 60 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 AC107297.1-201ENST00000459991 176 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-958P-201ENST00000516995 106 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 RNU6-365P-201ENST00000517113 106 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 AL442663.2-201ENST00000554385 511 ntBASIC0.66□□□□□ -2.3
LCMT2O60294 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.65□□□□□ -2.31
LCMT2O60294 RNU6-888P-201ENST00000363010 101 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 SNORA63-201ENST00000363450 132 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 Y_RNA.634-201ENST00000364811 113 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 Y_RNA.518-201ENST00000384552 113 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 RNU6-913P-201ENST00000390913 95 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 Y_RNA.590-201ENST00000410140 107 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
LCMT2O60294 AC244023.1-201ENST00000426884 112 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AF228730.3-201ENST00000436691 102 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AC087499.4-201ENST00000448505 178 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AL117187.1-201ENST00000555482 181 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 MIR4282-201ENST00000583613 67 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AC242498.1-201ENST00000604134 111 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AP000942.4-201ENST00000604811 241 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AC134878.1-201ENST00000619901 243 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 AL365265.1-201ENST00000621045 234 ntBASIC0.65□□□□□ -2.31
LCMT2O60294 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-369P-201ENST00000362515 102 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 Y_RNA.145-201ENST00000363527 102 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-580P-201ENST00000365159 107 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 Y_RNA.416-201ENST00000384014 113 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-738P-201ENST00000384531 106 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 SNORA40.5-201ENST00000391061 128 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.64□□□□□ -2.31
LCMT2O60294 snoU13.16-201ENST00000459350 104 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 AC113410.1-201ENST00000505029 247 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-561P-201ENST00000516222 102 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-1299P-201ENST00000516316 100 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 Y_RNA.679-201ENST00000516416 91 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-1110P-201ENST00000516462 101 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
LCMT2O60294 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
LCMT2O60294 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
LCMT2O60294 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LCMT2O60294 Y_RNA.76-201ENST00000362931 109 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 Y_RNA.176-201ENST00000363815 109 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 Y_RNA.304-201ENST00000365011 112 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 SNORA27-201ENST00000384323 126 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 MIR508-201ENST00000384857 115 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 MT-TN-201ENST00000387400 73 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 RNU6-1228P-201ENST00000391014 107 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AL606845.1-201ENST00000404881 255 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 RNU2-55P-201ENST00000411146 174 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 HMGN1P33-201ENST00000432945 451 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 AC011921.3-201ENST00000605540 361 ntBASIC0.63□□□□□ -2.31
LCMT2O60294 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
LCMT2O60294 MIR377-201ENST00000362145 69 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 Y_RNA.47-201ENST00000362697 108 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 RNU6-653P-201ENST00000363074 106 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 Y_RNA.277-201ENST00000364754 102 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 Y_RNA.459-201ENST00000384251 102 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 MIR598-201ENST00000384868 97 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 MIR616-201ENST00000385293 97 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 RNU6-381P-201ENST00000391259 108 ntBASIC0.62□□□□□ -2.31
LCMT2O60294 RNU2-70P-201ENST00000410718 179 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms