Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP000240.1-201ENST00000609910 452 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 AC007494.3-201ENST00000624660 743 ntBASIC-1.88□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 RNY1P2-201ENST00000364820 117 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORA18-201ENST00000384416 132 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR519E-201ENST00000385075 84 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AC098614.3-201ENST00000438957 440 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 RNA5SP461-201ENST00000516451 104 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AP001542.1-201ENST00000591314 200 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR548AY-201ENST00000617669 107 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AC022140.2-201ENST00000623500 188 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 AC132825.6-201ENST00000638861 357 ntBASIC-1.89□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD116-9-201ENST00000384000 95 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD116-3-201ENST00000384287 95 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD116-8-201ENST00000384365 95 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD116-7-201ENST00000384404 95 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 SNORD116-5-201ENST00000384462 95 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 RNU6-710P-201ENST00000410424 105 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 AC084290.1-201ENST00000434995 374 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 AP001506.1-201ENST00000615444 211 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 MIR6841-201ENST00000637129 72 ntBASIC-1.9□□□□□ -2.71
CHKB-CPT1BH3BT56 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-95P-201ENST00000384697 107 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR190B-201ENST00000401119 79 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-408P-201ENST00000515910 100 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR4460-201ENST00000577862 86 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 AC079248.2-201ENST00000623779 326 ntBASIC-1.91□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR302B-201ENST00000362188 73 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-38P-201ENST00000384085 107 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR548A2-201ENST00000384956 97 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR617-201ENST00000385030 97 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 TRAJ51-201ENST00000504127 63 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-479P-201ENST00000516348 105 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR548AG2-201ENST00000581228 64 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 AL022161.1-201ENST00000604390 213 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 AL080274.1-201ENST00000605565 220 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR8068-201ENST00000618032 68 ntBASIC-1.92□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-961P-201ENST00000363893 105 ntBASIC-1.93□□□□□ -2.72
CHKB-CPT1BH3BT56 SNORA72.3-201ENST00000365074 132 ntBASIC-1.93□□□□□ -2.72
CHKB-CPT1BH3BT56 SNORD12B-201ENST00000410433 91 ntBASIC-1.93□□□□□ -2.72
CHKB-CPT1BH3BT56 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.93□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR548AB-201ENST00000584917 84 ntBASIC-1.93□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 AL353813.1-201ENST00000440700 253 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU7-149P-201ENST00000516739 59 ntBASIC-1.94□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-596P-201ENST00000365395 98 ntBASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 AF228730.4-201ENST00000421457 183 ntBASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-155P-201ENST00000516347 100 ntBASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR5591-201ENST00000578248 65 ntBASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 AC124303.1-201ENST00000605703 360 ntBASIC-1.95□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR342-201ENST00000362212 99 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-905P-201ENST00000384434 107 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-476P-201ENST00000384726 107 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU2-14P-201ENST00000411053 191 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 AC023449.1-201ENST00000454464 154 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-693P-201ENST00000516134 107 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 RN7SKP299-201ENST00000606679 301 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 AC019193.3-201ENST00000609144 554 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 AC098479.1-201ENST00000609225 154 ntBASIC-1.96□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU6-429P-201ENST00000384582 108 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 AL590004.1-201ENST00000405321 300 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 SNORA36B-201ENST00000410438 131 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 BX295541.1-201ENST00000417774 250 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 AC016907.1-201ENST00000419483 435 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU7-79P-201ENST00000516082 62 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 RNA5SP395-201ENST00000516567 118 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR5701-3-201ENST00000578890 82 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR5701-1-201ENST00000585138 82 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 AL121655.1-201ENST00000605811 308 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 PART1_1.1-201ENST00000611761 217 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR5701-2-201ENST00000615634 82 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR7111-201ENST00000619751 72 ntBASIC-1.97□□□□□ -2.72
CHKB-CPT1BH3BT56 MIR519A1-201ENST00000385257 85 ntBASIC-1.98□□□□□ -2.73
CHKB-CPT1BH3BT56 MIR652-201ENST00000385278 98 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms