Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.34□□□□□ -2.03
U3KQE9 MIR8055-201ENST00000610739 97 ntBASIC2.34□□□□□ -2.03
U3KQE9 MIR7112-201ENST00000616126 65 ntBASIC2.34□□□□□ -2.03
U3KQE9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.34□□□□□ -2.03
U3KQE9 AC093010.3-201ENST00000570269 15214 ntBASIC2.33□□□□□ -2.04
U3KQE9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
U3KQE9 SNORA63.1-201ENST00000362493 131 ntBASIC2.33□□□□□ -2.04
U3KQE9 SNORA71.3-201ENST00000362582 128 ntBASIC2.33□□□□□ -2.04
U3KQE9 RNU1-51P-201ENST00000365345 176 ntBASIC2.33□□□□□ -2.04
U3KQE9 SNORA32-201ENST00000384072 121 ntBASIC2.33□□□□□ -2.04
U3KQE9 MIR518A2-201ENST00000384966 87 ntBASIC2.33□□□□□ -2.04
U3KQE9 SNORD28B-201ENST00000390993 75 ntBASIC2.33□□□□□ -2.04
U3KQE9 RPL23AP6-201ENST00000446637 472 ntBASIC2.33□□□□□ -2.04
U3KQE9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
U3KQE9 RNA5SP380-201ENST00000517190 98 ntBASIC2.33□□□□□ -2.04
U3KQE9 MIR5004-201ENST00000579078 107 ntBASIC2.33□□□□□ -2.04
U3KQE9 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
U3KQE9 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
U3KQE9 Z97988.1-201ENST00000637697 135 ntBASIC2.33□□□□□ -2.04
U3KQE9 AC009487.2-201ENST00000420969 6821 ntBASIC2.33□□□□□ -2.04
U3KQE9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
U3KQE9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
U3KQE9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
U3KQE9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
U3KQE9 RNU6-112P-201ENST00000363599 104 ntBASIC2.32□□□□□ -2.04
U3KQE9 MIR526A1-201ENST00000384897 85 ntBASIC2.32□□□□□ -2.04
U3KQE9 MIR7-3-201ENST00000384898 110 ntBASIC2.32□□□□□ -2.04
U3KQE9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.32□□□□□ -2.04
U3KQE9 RNU6-1190P-201ENST00000410811 104 ntBASIC2.32□□□□□ -2.04
U3KQE9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.32□□□□□ -2.04
U3KQE9 RN7SL633P-201ENST00000488974 297 ntBASIC2.32□□□□□ -2.04
U3KQE9 RNA5SP437-201ENST00000517249 129 ntBASIC2.32□□□□□ -2.04
U3KQE9 AC019288.1-201ENST00000557918 224 ntBASIC2.32□□□□□ -2.04
U3KQE9 MIR6798-201ENST00000612887 67 ntBASIC2.32□□□□□ -2.04
U3KQE9 MIR376B-201ENST00000614515 100 ntBASIC2.32□□□□□ -2.04
U3KQE9 MIR6075-201ENST00000620782 95 ntBASIC2.32□□□□□ -2.04
U3KQE9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
U3KQE9 RNA5SP72-201ENST00000364442 117 ntBASIC2.31□□□□□ -2.04
U3KQE9 SNORD38.2-201ENST00000384470 69 ntBASIC2.31□□□□□ -2.04
U3KQE9 RNU6-296P-201ENST00000384608 107 ntBASIC2.31□□□□□ -2.04
U3KQE9 MIR206-201ENST00000384872 86 ntBASIC2.31□□□□□ -2.04
U3KQE9 SNORD67-201ENST00000390833 111 ntBASIC2.31□□□□□ -2.04
U3KQE9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.31□□□□□ -2.04
U3KQE9 HMGN2P3-201ENST00000433603 273 ntBASIC2.31□□□□□ -2.04
U3KQE9 HMGN2P5-201ENST00000436882 273 ntBASIC2.31□□□□□ -2.04
U3KQE9 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
U3KQE9 AC099513.1-201ENST00000490423 301 ntBASIC2.31□□□□□ -2.04
U3KQE9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.31□□□□□ -2.04
U3KQE9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.31□□□□□ -2.04
U3KQE9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
U3KQE9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
U3KQE9 SNORD114-10-201ENST00000363409 72 ntBASIC2.3□□□□□ -2.04
U3KQE9 Y_RNA.244-201ENST00000364484 109 ntBASIC2.3□□□□□ -2.04
U3KQE9 U8.9-201ENST00000365667 134 ntBASIC2.3□□□□□ -2.04
U3KQE9 RNU6-787P-201ENST00000384032 107 ntBASIC2.3□□□□□ -2.04
U3KQE9 RNU6-24P-201ENST00000384440 107 ntBASIC2.3□□□□□ -2.04
U3KQE9 HMGN2P39-201ENST00000398005 273 ntBASIC2.3□□□□□ -2.04
U3KQE9 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
U3KQE9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.3□□□□□ -2.04
U3KQE9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.3□□□□□ -2.04
U3KQE9 RPS29P28-201ENST00000446439 141 ntBASIC2.3□□□□□ -2.04
U3KQE9 RNVU1-2-201ENST00000516326 135 ntBASIC2.3□□□□□ -2.04
U3KQE9 MIR8065-201ENST00000620577 100 ntBASIC2.3□□□□□ -2.04
U3KQE9 AC007318.2-201ENST00000620999 243 ntBASIC2.3□□□□□ -2.04
U3KQE9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
U3KQE9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.29□□□□□ -2.04
U3KQE9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
U3KQE9 MIR22-201ENST00000362190 85 ntBASIC2.29□□□□□ -2.04
U3KQE9 RNU6-509P-201ENST00000363519 107 ntBASIC2.29□□□□□ -2.04
U3KQE9 RNU6-1163P-201ENST00000364516 107 ntBASIC2.29□□□□□ -2.04
U3KQE9 RNU6-865P-201ENST00000364772 107 ntBASIC2.29□□□□□ -2.04
U3KQE9 SNORA54-201ENST00000384281 123 ntBASIC2.29□□□□□ -2.04
U3KQE9 RNVU1-14-201ENST00000384770 164 ntBASIC2.29□□□□□ -2.04
U3KQE9 Y_RNA.607-201ENST00000410597 98 ntBASIC2.29□□□□□ -2.04
U3KQE9 RNA5SP492-201ENST00000411330 114 ntBASIC2.29□□□□□ -2.04
U3KQE9 AC245047.7-201ENST00000440265 293 ntBASIC2.29□□□□□ -2.04
U3KQE9 UBL5P1-201ENST00000507979 193 ntBASIC2.29□□□□□ -2.04
U3KQE9 MIR4429-201ENST00000580105 73 ntBASIC2.29□□□□□ -2.04
U3KQE9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.29□□□□□ -2.04
U3KQE9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
U3KQE9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.28□□□□□ -2.04
U3KQE9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
U3KQE9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
U3KQE9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.28□□□□□ -2.04
U3KQE9 RNU6-633P-201ENST00000362612 103 ntBASIC2.28□□□□□ -2.04
U3KQE9 RNU6-1244P-201ENST00000363614 108 ntBASIC2.28□□□□□ -2.04
U3KQE9 Y_RNA.437-201ENST00000384113 113 ntBASIC2.28□□□□□ -2.04
U3KQE9 MIR34B-201ENST00000385076 84 ntBASIC2.28□□□□□ -2.04
U3KQE9 PRSS3P4-201ENST00000453323 162 ntBASIC2.28□□□□□ -2.04
U3KQE9 RNU6-857P-201ENST00000515893 110 ntBASIC2.28□□□□□ -2.04
U3KQE9 RNU6-267P-201ENST00000516714 103 ntBASIC2.28□□□□□ -2.04
U3KQE9 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
U3KQE9 AC103810.7-201ENST00000607821 91 ntBASIC2.28□□□□□ -2.04
U3KQE9 AC012314.7-201ENST00000619693 93 ntBASIC2.28□□□□□ -2.04
U3KQE9 AC008133.2-201ENST00000624540 351 ntBASIC2.28□□□□□ -2.04
U3KQE9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
U3KQE9 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
U3KQE9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
U3KQE9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
U3KQE9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 242.8 ms