Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR2115-201ENST00000516657 100 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 AP003072.1-201ENST00000531740 145 ntBASIC0.73□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.44-201ENST00000362676 108 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 SNORD113.3-201ENST00000364630 78 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 SNORA8.3-201ENST00000384679 139 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 MIR526A2-201ENST00000390198 65 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 MTCO2P24-201ENST00000515611 426 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 MIR4662B-201ENST00000579498 81 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 AL353765.1-201ENST00000605514 183 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 MIR7111-201ENST00000619751 72 ntBASIC0.72□□□□□ -2.29
ATG4BQ9Y4P1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 AL035398.1-201ENST00000430869 322 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 RNU7-67P-201ENST00000459003 62 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-693P-201ENST00000516134 107 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 AL136317.1-201ENST00000612653 226 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 AP001282.2-201ENST00000616149 309 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-28-201ENST00000363931 81 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-740P-201ENST00000364734 105 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-205P-201ENST00000390858 107 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.7□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.422-201ENST00000384054 114 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-651P-201ENST00000411040 105 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-958P-201ENST00000516995 106 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AC100767.1-201ENST00000528178 123 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AC007751.1-201ENST00000529260 376 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AC006504.6-201ENST00000590142 199 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AC022709.1-201ENST00000615967 87 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
ATG4BQ9Y4P1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 MIR626-201ENST00000385032 94 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 MIR1302-6-201ENST00000408466 90 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 AL606490.4-201ENST00000423117 127 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 RNU2-13P-201ENST00000515909 113 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-365P-201ENST00000517113 106 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 AP000753.3-201ENST00000604083 169 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 AC104465.1-201ENST00000611365 139 ntBASIC0.68□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-34-201ENST00000362441 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-12-201ENST00000362583 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.37-201ENST00000362606 108 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-29-201ENST00000362834 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-9-201ENST00000362912 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-21-201ENST00000362963 81 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-14-201ENST00000363090 81 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-13-201ENST00000363358 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-41-201ENST00000363608 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-11-201ENST00000363616 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-5-201ENST00000363633 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-39-201ENST00000363694 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-4-201ENST00000363810 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-16-201ENST00000363887 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-6-201ENST00000363942 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-42-201ENST00000364273 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-15-201ENST00000364809 81 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-1-201ENST00000364961 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-26-201ENST00000365067 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-10-201ENST00000365073 81 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-43-201ENST00000365503 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-36-201ENST00000365629 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD61-201ENST00000384252 73 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 RNU6-125P-201ENST00000384505 107 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 MIR518F-201ENST00000384973 87 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 MT-TT-201ENST00000387460 66 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 snoU13.16-201ENST00000459350 104 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 AP003484.1-201ENST00000530974 250 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 MIR5000-201ENST00000577717 103 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 MIR5688-201ENST00000580619 83 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 SNORD115-40-201ENST00000606510 82 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 U2.14-201ENST00000615943 113 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.67□□□□□ -2.3
ATG4BQ9Y4P1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
ATG4BQ9Y4P1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms