Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.410-201ENST00000383992 113 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 MIR548O-201ENST00000408583 114 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP270-201ENST00000411361 118 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 AC060773.1-201ENST00000421698 310 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 AC009238.1-201ENST00000442165 424 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 AC009237.6-201ENST00000446969 424 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 Z82195.2-201ENST00000612348 18351 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP295-201ENST00000362655 121 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.155-201ENST00000363632 101 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 SNORD115-28-201ENST00000363931 81 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 RNU6-816P-201ENST00000390914 107 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 SNORD77.3-201ENST00000391113 65 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1268P-201ENST00000391214 107 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1239P-201ENST00000391310 107 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 AC008507.4-201ENST00000585464 127 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NOTCH3Q9UM47 SNORD115-19-201ENST00000363098 82 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNORD115-18-201ENST00000363293 82 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNORD115-17-201ENST00000364612 82 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP167-201ENST00000365461 116 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 U8.9-201ENST00000365667 134 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.433-201ENST00000384089 102 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 AC008134.1-201ENST00000420943 193 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNRPGP10-201ENST00000432323 225 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 MICF-203ENST00000432679 129 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNRPGP14-201ENST00000435400 219 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 AL358944.1-201ENST00000528537 144 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.96-201ENST00000363092 109 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 RNU1-133P-201ENST00000364867 167 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 RNU11-5P-201ENST00000391216 129 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 MIR1253-201ENST00000408273 105 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 AC073261.1-201ENST00000429409 121 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 AL353689.1-201ENST00000438895 199 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 RNU7-23P-201ENST00000459465 62 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 AC007336.1-201ENST00000576365 3828 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 MIR5588-201ENST00000581890 63 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 MIR6515-201ENST00000619843 57 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNORA50A-202ENST00000629536 136 ntBASIC1.51□□□□□ -2.17
NOTCH3Q9UM47 SNORD116-10-201ENST00000363791 102 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-60P-201ENST00000364792 103 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1083P-201ENST00000384022 107 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR520G-201ENST00000385064 90 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-788P-201ENST00000390967 104 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-733P-201ENST00000410759 104 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 FTH1P12-201ENST00000432137 551 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-162P-201ENST00000516228 103 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-521P-201ENST00000516663 105 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 ZNF271P-202ENST00000465539 1970 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR342-201ENST00000362212 99 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU1-105P-201ENST00000363470 161 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 SNORD45B-201ENST00000364617 72 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 AC093259.1-201ENST00000509755 300 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP112-201ENST00000515937 99 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 RNU6-267P-201ENST00000516714 103 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR4777-201ENST00000583710 86 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 AL356280.1-201ENST00000603614 379 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR6132-201ENST00000622083 109 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 MIR1255B1-201ENST00000636325 63 ntBASIC1.5□□□□□ -2.17
NOTCH3Q9UM47 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.265-201ENST00000364677 108 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.267-201ENST00000364679 109 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.332-201ENST00000365271 113 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-652P-201ENST00000365488 107 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP252-201ENST00000391131 119 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RPL39P39-201ENST00000455840 151 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU7-164P-201ENST00000459221 62 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU7-94P-201ENST00000459576 63 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 SNRPGP3-201ENST00000469405 227 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1018P-201ENST00000516577 106 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 AC078899.2-201ENST00000595282 212 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 MIR4662A-201ENST00000637499 67 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.37-201ENST00000362606 108 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1125P-201ENST00000363601 107 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-776P-201ENST00000364403 104 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU4-67P-201ENST00000364569 141 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 snoU2-30.1-201ENST00000365012 70 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-1022P-201ENST00000365049 104 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNU6-497P-201ENST00000365316 104 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 Y_RNA.354-201ENST00000365448 111 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 SNORD38C-201ENST00000384381 69 ntBASIC1.49□□□□□ -2.17
NOTCH3Q9UM47 RNA5SP402-201ENST00000517148 110 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms