Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC104465.1-201ENST00000611365 139 ntBASIC1.33□□□□□ -2.2
SLC52A3Q9NQ40 AC021753.1-201ENST00000635724 168 ntBASIC1.33□□□□□ -2.2
SLC52A3Q9NQ40 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SLC52A3Q9NQ40 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.357-201ENST00000365487 109 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-597P-201ENST00000365620 102 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-1062P-201ENST00000383908 107 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.398-201ENST00000383952 99 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.547-201ENST00000384654 119 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-768P-201ENST00000384683 107 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AC092991.1-201ENST00000477176 376 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU4-57P-201ENST00000515980 135 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-504P-201ENST00000516568 104 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-1270P-201ENST00000517128 108 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 MTND5P41-201ENST00000517498 206 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AL365205.2-201ENST00000594586 68 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AL645939.4-201ENST00000604495 135 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 AL121890.5-201ENST00000620848 304 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 MIR3658-201ENST00000636291 56 ntBASIC1.32□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.170-201ENST00000363746 110 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.337-201ENST00000365312 102 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.393-201ENST00000383936 102 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 SNORA1-201ENST00000384107 130 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 SNORD38C-201ENST00000384381 69 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 MIR516B2-201ENST00000385190 85 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 RNA5SP247-201ENST00000411181 105 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 AC015726.2-201ENST00000620112 122 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
SLC52A3Q9NQ40 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 SNORD116-18-201ENST00000383961 92 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-693P-201ENST00000516134 107 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 SNORD116-25-201ENST00000516517 92 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 MIR3937-201ENST00000580135 106 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 DNAJC19P2-201ENST00000593340 302 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
SLC52A3Q9NQ40 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-818P-201ENST00000364837 108 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNA5SP259-201ENST00000365541 109 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-1336P-201ENST00000383886 109 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.506-201ENST00000384494 102 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.542-201ENST00000384641 111 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-321P-201ENST00000410912 106 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-938P-201ENST00000411285 103 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 MIR376A2-201ENST00000636782 80 ntBASIC1.29□□□□□ -2.2
SLC52A3Q9NQ40 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.8-201ENST00000362353 102 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 SNORD115-28-201ENST00000363931 81 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-1082P-201ENST00000364574 107 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 SNORA2.2-201ENST00000365473 135 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 RNU6-449P-201ENST00000383914 107 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.521-201ENST00000384560 114 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 SNORD77.3-201ENST00000391113 65 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 AF228730.3-201ENST00000436691 102 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 RNU7-200P-201ENST00000516105 62 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 MIR3646-201ENST00000578301 84 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 AL365434.2-201ENST00000607979 234 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.778-201ENST00000620203 90 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
SLC52A3Q9NQ40 Y_RNA.37-201ENST00000362606 108 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 RNY1P11-201ENST00000363759 113 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 RNU6-1292P-201ENST00000383856 107 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 RNY1P5-201ENST00000383890 115 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 MIR624-201ENST00000385217 97 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 SNORA75.5-201ENST00000391291 81 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 MTND1P7-201ENST00000632801 297 ntBASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SLC52A3Q9NQ40 SNORA25.7-201ENST00000364375 127 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 RNU4-11P-201ENST00000365287 132 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 SNORD123-201ENST00000459473 70 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 SNORD36C-201ENST00000516733 66 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 AC134878.1-201ENST00000619901 243 ntBASIC1.26□□□□□ -2.21
SLC52A3Q9NQ40 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SLC52A3Q9NQ40 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
SLC52A3Q9NQ40 RNU6-151P-201ENST00000364158 107 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms