Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC062037.1-201ENST00000605302 128 ntBASIC2.48□□□□□ -2.01
SSU72Q9NP77 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.47□□□□□ -2.01
SSU72Q9NP77 RNY3P2-201ENST00000362918 102 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 Y_RNA.333-201ENST00000365274 102 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 MIR605-201ENST00000385078 83 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 MIR577-201ENST00000385196 96 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 MIR136-201ENST00000385207 82 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SSU72Q9NP77 SNORA26.2-201ENST00000390922 122 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 RNU4-69P-201ENST00000410677 143 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 RNU6-958P-201ENST00000516995 106 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 SNORA70.24-201ENST00000517233 118 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 U4.3-201ENST00000621047 82 ntBASIC2.47□□□□□ -2.01
SSU72Q9NP77 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 Y_RNA.360-201ENST00000365512 102 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 MIR483-201ENST00000385070 76 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 RNA5SP492-201ENST00000411330 114 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 SNORD123-201ENST00000459473 70 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 AC107297.1-201ENST00000459991 176 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 SCARNA23-201ENST00000516060 130 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 MIR5195-201ENST00000583555 115 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
SSU72Q9NP77 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SSU72Q9NP77 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSU72Q9NP77 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 Y_RNA.107-201ENST00000363190 121 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 SNORA1.2-201ENST00000365189 134 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 MIR660-201ENST00000385235 97 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 RPS29P29-201ENST00000456396 171 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 RNU7-113P-201ENST00000459273 62 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 RNA5SP341-201ENST00000516261 117 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 MIR548AE2-201ENST00000583456 67 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 AC006023.1-201ENST00000603944 259 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 AL513423.1-201ENST00000621695 132 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 MIR6717-201ENST00000622747 73 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 AC064859.1-201ENST00000624741 174 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 MIR2052-201ENST00000636055 55 ntBASIC2.45□□□□□ -2.02
SSU72Q9NP77 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSU72Q9NP77 MIR208A-201ENST00000362287 71 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 SNORA22.1-201ENST00000362701 134 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 SNORA38-201ENST00000363946 132 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 Y_RNA.220-201ENST00000364244 109 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 RNU4-67P-201ENST00000364569 141 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 RNU1-109P-201ENST00000383960 147 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 RNU6-679P-201ENST00000391003 106 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 Y_RNA.601-201ENST00000410500 113 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 RNU7-67P-201ENST00000459003 62 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 MIR4694-201ENST00000578534 80 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 MIR548Z-201ENST00000584743 97 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 AL020996.3-201ENST00000606617 222 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 AC012531.4-201ENST00000616509 177 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 MIR8057-201ENST00000620957 69 ntBASIC2.44□□□□□ -2.02
SSU72Q9NP77 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.44□□□□□ -2.02
SSU72Q9NP77 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SSU72Q9NP77 RNU6-832P-201ENST00000363319 107 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU6-525P-201ENST00000363685 104 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU4-36P-201ENST00000364294 144 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 Y_RNA.299-201ENST00000364973 94 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 Y_RNA.430-201ENST00000384081 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU6-616P-201ENST00000384353 107 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 Y_RNA.507-201ENST00000384500 99 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 MIR491-201ENST00000384877 84 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU6-733P-201ENST00000410759 104 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNA5SP100-201ENST00000410903 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNA5SP59-201ENST00000410922 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 AC105272.1-201ENST00000438604 198 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 PGBD4P5-201ENST00000445958 426 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU7-73P-201ENST00000458743 63 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 snoU13.27-201ENST00000459278 104 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 RNU7-34P-201ENST00000459394 64 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.43□□□□□ -2.02
SSU72Q9NP77 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 MIR4709-201ENST00000577272 72 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 AC024614.2-201ENST00000577584 372 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 MIR4791-201ENST00000607666 84 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.43□□□□□ -2.02
SSU72Q9NP77 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.43□□□□□ -2.02
SSU72Q9NP77 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
SSU72Q9NP77 Y_RNA.155-201ENST00000363632 101 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 RNU6-457P-201ENST00000363999 107 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 RNU2-7P-201ENST00000410794 178 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 AL513328.1-201ENST00000446460 224 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 RNU6-893P-201ENST00000458841 100 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 AC243994.1-201ENST00000618627 109 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 AC005336.3-201ENST00000623833 2679 ntBASIC2.42□□□□□ -2.02
SSU72Q9NP77 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSU72Q9NP77 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SSU72Q9NP77 Y_RNA.290-201ENST00000364879 114 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNU1-138P-201ENST00000384093 164 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNU6-409P-201ENST00000384114 104 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.41□□□□□ -2.02
SSU72Q9NP77 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms