Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.69□□□□□ -1.98
RC3H2Q9HBD1 AC016717.2-201ENST00000609089 5141 ntBASIC2.69□□□□□ -1.98
RC3H2Q9HBD1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RC3H2Q9HBD1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 RNU6-60P-201ENST00000364792 103 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 Y_RNA.313-201ENST00000365095 103 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 SNORD115-35-201ENST00000365122 82 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 RNU6-1296P-201ENST00000383879 107 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 Y_RNA.454-201ENST00000384224 113 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 SNORA8-201ENST00000384574 139 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 SNX2P2-201ENST00000424553 323 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 AL356320.1-201ENST00000429616 163 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 MIR4666B-201ENST00000578142 81 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.68□□□□□ -1.98
RC3H2Q9HBD1 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 SNORD115-13-201ENST00000363358 82 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 SNORD115-16-201ENST00000363887 82 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 SNORD115-1-201ENST00000364961 82 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 RNU6-409P-201ENST00000384114 104 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 RNU6-679P-201ENST00000391003 106 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 AL627390.1-201ENST00000396055 340 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 MRPL35P3-201ENST00000421557 364 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 RNU7-171P-201ENST00000459581 62 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 RNU6-857P-201ENST00000515893 110 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 MIR4778-201ENST00000577635 80 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
RC3H2Q9HBD1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 MIR342-201ENST00000362212 99 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 SNORD114-6-201ENST00000364393 72 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 SNORA80E-201ENST00000384744 137 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 POLR2J4-204ENST00000418424 324 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 snoU13.23-201ENST00000458863 104 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 AL163195.1-201ENST00000496941 348 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 MIR1273D-201ENST00000577266 86 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
RC3H2Q9HBD1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
RC3H2Q9HBD1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU6-160P-201ENST00000384591 107 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNA5SP323-201ENST00000391094 133 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 AL606517.2-201ENST00000442855 241 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU7-26P-201ENST00000458980 63 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU7-94P-201ENST00000459576 63 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 RNU6-998P-201ENST00000515894 101 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 ICE2P2-201ENST00000483823 2787 ntBASIC2.65□□□□□ -1.99
RC3H2Q9HBD1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 SNORD116-22-201ENST00000384430 92 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR764-201ENST00000390811 85 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 AL022718.1-201ENST00000412004 84 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR1270-201ENST00000459320 83 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 AC021613.1-201ENST00000623880 111 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 AL442644.1-201ENST00000454390 3105 ntBASIC2.64□□□□□ -1.99
RC3H2Q9HBD1 AC092881.1-201ENST00000638218 2733 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 Y_RNA.95-201ENST00000363079 95 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 Y_RNA.377-201ENST00000365644 108 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 Y_RNA.437-201ENST00000384113 113 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 Y_RNA.467-201ENST00000384297 102 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 SNORA27-201ENST00000384323 126 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 SNORA18-201ENST00000384416 132 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 MIR1289-2-201ENST00000408360 111 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 SNORA7.5-201ENST00000410672 110 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 AL035398.1-201ENST00000430869 322 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.63□□□□□ -1.99
RC3H2Q9HBD1 RNU2-11P-201ENST00000459191 187 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms