Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU6-381P-201ENST00000391259 108 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 MIR548O-201ENST00000408583 114 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 MTND3P2-201ENST00000438452 342 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 RPL39P39-201ENST00000455840 151 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.77□□□□□ -2.29
NANOGQ9H9S0 RNU2-13P-201ENST00000515909 113 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 RNA5SP220-201ENST00000516298 104 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.673-201ENST00000516306 88 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 MIR548AO-201ENST00000579992 96 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 AC211469.2-201ENST00000605461 205 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
NANOGQ9H9S0 MIR376A2-201ENST00000636782 80 ntBASIC0.77□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 SNORD27-201ENST00000363981 72 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.352-201ENST00000365439 102 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 MIR802-201ENST00000390235 94 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 RNA5SP95-201ENST00000410319 137 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 AL392103.1-201ENST00000447000 198 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.76□□□□□ -2.29
NANOGQ9H9S0 SNORA31.4-201ENST00000516049 129 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 RNU7-43P-201ENST00000516554 64 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 MIR3128-201ENST00000581957 66 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 MIR6516-201ENST00000630554 81 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 MTND1P7-201ENST00000632801 297 ntBASIC0.76□□□□□ -2.29
NANOGQ9H9S0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR103A2-201ENST00000362154 78 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.288-201ENST00000364854 92 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.292-201ENST00000364904 97 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR520E-201ENST00000384867 87 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR518E-201ENST00000385252 88 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 AC063976.4-201ENST00000421971 163 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.679-201ENST00000516416 91 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 SNORD36C-201ENST00000516733 66 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 AC023827.1-201ENST00000569247 97 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR4791-201ENST00000607666 84 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR6734-201ENST00000621166 68 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 MIR4251-201ENST00000635819 61 ntBASIC0.75□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.116-201ENST00000363292 103 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 RNY4P28-201ENST00000365281 93 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 RNU6-42P-201ENST00000384165 107 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 SNORA80D-201ENST00000384488 135 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AL606845.1-201ENST00000404881 255 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AF228730.3-201ENST00000436691 102 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 RNU6-693P-201ENST00000516134 107 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AC109810.1-201ENST00000534066 224 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 AL442067.1-201ENST00000613261 223 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.74□□□□□ -2.29
NANOGQ9H9S0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
NANOGQ9H9S0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.23-201ENST00000362496 106 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.37-201ENST00000362606 108 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 SNORD45.3-201ENST00000363836 72 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 SNORA1-201ENST00000384107 130 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 MIR616-201ENST00000385293 97 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 SNORD58.1-201ENST00000391313 66 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
NANOGQ9H9S0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
NANOGQ9H9S0 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 SNORA18.4-201ENST00000516440 124 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 MIR4308-201ENST00000580634 81 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
NANOGQ9H9S0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
NANOGQ9H9S0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-923P-201ENST00000364753 107 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.307-201ENST00000365022 117 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 Y_RNA.447-201ENST00000384184 113 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 MIR15B-201ENST00000385045 98 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-913P-201ENST00000390913 95 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-493P-201ENST00000391321 108 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-1007P-201ENST00000516586 107 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-111P-201ENST00000517179 105 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 AC036111.3-201ENST00000526389 112 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 MIR5688-201ENST00000580619 83 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 RNU6-94P-201ENST00000607728 107 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 AC062037.2-201ENST00000610137 73 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 AC243994.1-201ENST00000618627 109 ntBASIC0.72□□□□□ -2.29
NANOGQ9H9S0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms