Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 SNORA22.1-201ENST00000362701 134 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-424P-201ENST00000384367 105 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 MIR1262-201ENST00000408276 93 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 MIR1267-201ENST00000408723 78 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC022018.1-201ENST00000430685 241 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC015922.2-201ENST00000435593 184 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 AC108729.3-201ENST00000513484 108 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 Z82195.2-201ENST00000612348 18351 ntBASIC3.07□□□□□ -1.92
NUCKS1Q9H1E3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-509P-201ENST00000363519 107 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 SNORA25B-201ENST00000365507 128 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.430-201ENST00000384081 110 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 UBL5P3-201ENST00000475112 231 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-2-201ENST00000582974 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-1-201ENST00000584160 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-3-201ENST00000584855 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR3670-4-201ENST00000612260 65 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 MIR376B-201ENST00000614515 100 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 AC027279.3-201ENST00000625055 122 ntBASIC3.06□□□□□ -1.92
NUCKS1Q9H1E3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 RNA5SP493-201ENST00000364115 91 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR23A-201ENST00000385245 73 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 AL139132.1-201ENST00000431587 344 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 AL049873.1-201ENST00000480540 376 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 EIF4BP1-201ENST00000554881 351 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR5194-201ENST00000582634 120 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 MIR8054-201ENST00000620877 86 ntBASIC3.05□□□□□ -1.92
NUCKS1Q9H1E3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.247-201ENST00000364500 92 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 RNU6-220P-201ENST00000390919 107 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.607-201ENST00000410597 98 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 RN7SKP192-201ENST00000411291 327 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC090844.1-201ENST00000422019 156 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SCARNA13-201ENST00000516672 275 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 MIR3152-201ENST00000579801 74 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC103810.7-201ENST00000607821 91 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC006386.2-201ENST00000624491 75 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AC012005.1-201ENST00000624575 75 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 AL137790.1-201ENST00000634283 177 ntBASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
NUCKS1Q9H1E3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 SNORA26.6-201ENST00000391256 115 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AC003685.2-201ENST00000422795 395 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 RNU7-34P-201ENST00000459394 64 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 MIR3169-201ENST00000578032 83 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 SNORA28-201ENST00000606769 126 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.03□□□□□ -1.92
NUCKS1Q9H1E3 AC007336.1-201ENST00000576365 3828 ntBASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 SNORA32-201ENST00000384072 121 ntBASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.02□□□□□ -1.93
NUCKS1Q9H1E3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-633P-201ENST00000362612 103 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.316-201ENST00000365118 111 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 COTL1P1-201ENST00000422309 375 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 UBL5P1-201ENST00000507979 193 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 SNORA31.10-201ENST00000516482 106 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-86P-201ENST00000606534 107 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 AC022513.1-201ENST00000624512 117 ntBASIC3.01□□□□□ -1.93
NUCKS1Q9H1E3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.94-201ENST00000363068 106 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUCKS1Q9H1E3 MIR889-201ENST00000401280 79 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1190P-201ENST00000410811 104 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1006P-201ENST00000516998 103 ntBASIC3□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-833P-201ENST00000363486 107 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA1.2-201ENST00000365189 134 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 SNORA70.7-201ENST00000384159 133 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 MIR627-201ENST00000384979 97 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-788P-201ENST00000390967 104 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 U8.16-201ENST00000391279 133 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 Y_RNA.609-201ENST00000410669 89 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RPS12P2-201ENST00000439728 269 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU7-53P-201ENST00000516705 60 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 RNU6-958P-201ENST00000516995 106 ntBASIC2.99□□□□□ -1.93
NUCKS1Q9H1E3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms