Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORA40.15-201ENST00000516884 107 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 AP003733.2-201ENST00000529409 171 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 AL008718.3-201ENST00000610217 321 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 uc_338.4-201ENST00000616635 176 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 snoU18.1-201ENST00000629629 71 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 MIR6516-201ENST00000630554 81 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
FOXC2Q99958 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
FOXC2Q99958 Y_RNA.242-201ENST00000364473 110 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNU6-580P-201ENST00000365159 107 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 SNORA24-201ENST00000384096 131 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNU6-662P-201ENST00000384253 104 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 MIR526A2-201ENST00000390198 65 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 Y_RNA.587-201ENST00000391210 103 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNU6-613P-201ENST00000410412 108 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNU6-1203P-201ENST00000410703 110 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 U7.7-201ENST00000459276 60 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNY3P15-201ENST00000516297 97 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 RNU6-1007P-201ENST00000516586 107 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 AC007751.1-201ENST00000529260 376 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
FOXC2Q99958 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.54□□□□□ -2.32
FOXC2Q99958 Y_RNA.370-201ENST00000365589 108 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 Y_RNA.547-201ENST00000384654 119 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 RNU6-1109P-201ENST00000391187 107 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 SERF1AP1-201ENST00000514575 187 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 SNORD77.4-201ENST00000516158 81 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 RNU7-149P-201ENST00000516739 59 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 RNU7-181P-201ENST00000517234 74 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.53□□□□□ -2.32
FOXC2Q99958 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 AL356055.1-201ENST00000602528 446 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 MIR4791-201ENST00000607666 84 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 MTND1P7-201ENST00000632801 297 ntBASIC0.53□□□□□ -2.32
FOXC2Q99958 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
FOXC2Q99958 RNU6-654P-201ENST00000364373 107 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 Y_RNA.330-201ENST00000365230 109 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 Y_RNA.486-201ENST00000384398 107 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 Y_RNA.494-201ENST00000384432 111 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 Y_RNA.518-201ENST00000384552 113 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 MIR570-201ENST00000384917 97 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 SNORA53-201ENST00000391141 249 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 SNORD111-201ENST00000408139 94 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 RNU6-938P-201ENST00000411285 103 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.52□□□□□ -2.33
FOXC2Q99958 MTND5P22-201ENST00000458380 195 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 HAR1A.1-201ENST00000459583 118 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 RNU6-1338P-201ENST00000516328 91 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 RNU7-25P-201ENST00000516544 62 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 MIR548AO-201ENST00000579992 96 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 AP001282.2-201ENST00000616149 309 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.52□□□□□ -2.33
FOXC2Q99958 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
FOXC2Q99958 RNU6-369P-201ENST00000362515 102 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 Y_RNA.152-201ENST00000363578 100 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 SNORD113.3-201ENST00000364630 78 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 Y_RNA.280-201ENST00000364765 112 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 RNU6-35P-201ENST00000384530 107 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 MIR548A2-201ENST00000384956 97 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 BTF3P11-201ENST00000426582 477 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 SNORD2.1-201ENST00000458762 69 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.51□□□□□ -2.33
FOXC2Q99958 AC023827.1-201ENST00000569247 97 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 MIR4724-201ENST00000579485 89 ntBASIC0.51□□□□□ -2.33
FOXC2Q99958 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
FOXC2Q99958 SNORA25.1-201ENST00000362326 128 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 Y_RNA.168-201ENST00000363740 102 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 Y_RNA.275-201ENST00000364726 110 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 SNORA1.2-201ENST00000365189 134 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 RNU6-211P-201ENST00000384047 107 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 SNORA51.10-201ENST00000384418 136 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 MIR626-201ENST00000385032 94 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 RNU6-847P-201ENST00000411115 108 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 Y_RNA.666-201ENST00000516187 112 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 RNU6-1153P-201ENST00000516760 105 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 AC044792.1-201ENST00000593294 196 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 AL049861.1-201ENST00000603130 150 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 AC015726.2-201ENST00000620112 122 ntBASIC0.5□□□□□ -2.33
FOXC2Q99958 MIR377-201ENST00000362145 69 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 Y_RNA.11-201ENST00000362375 109 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 SNORD45.3-201ENST00000363836 72 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU4-10P-201ENST00000364383 140 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 SNORD24-201ENST00000383884 75 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU6-639P-201ENST00000384074 107 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU6-1289P-201ENST00000384431 106 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 Y_RNA.572-201ENST00000384757 98 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR518F-201ENST00000384973 87 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MT-TN-201ENST00000387400 73 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 SNORD89-201ENST00000390981 114 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 MIR548O-201ENST00000408583 114 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 AC087499.4-201ENST00000448505 178 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
FOXC2Q99958 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms