Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MT-TI-201ENST00000387365 69 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 RNU2-11P-201ENST00000459191 187 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 RNU2-35P-201ENST00000516446 142 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 AL035470.1-201ENST00000622571 220 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 AL589743.1-201ENST00000551932 2712 ntBASIC2.25□□□□□ -2.05
PTCHD1Q96NR3 MIR424-201ENST00000362227 98 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP289-201ENST00000362332 137 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 SNORA63.5-201ENST00000363548 123 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 SNORA67.4-201ENST00000384688 142 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 RNU6-1104P-201ENST00000384723 104 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 MIR526A1-201ENST00000384897 85 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 UBL5P3-201ENST00000475112 231 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 SNORA31.4-201ENST00000516049 129 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 RNU6-168P-201ENST00000516189 101 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 AC022523.2-201ENST00000561045 150 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.24□□□□□ -2.05
PTCHD1Q96NR3 RNU6-1298P-201ENST00000362456 101 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 Y_RNA.362-201ENST00000365518 110 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 SNORA6-201ENST00000384033 151 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 SNORA70.7-201ENST00000384159 133 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP89-201ENST00000410300 108 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 RNU6-554P-201ENST00000410466 106 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 AC021613.1-201ENST00000623880 111 ntBASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.23□□□□□ -2.05
PTCHD1Q96NR3 Y_RNA.49-201ENST00000362714 112 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RNU6-32P-201ENST00000383948 107 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RNU6-13P-201ENST00000384248 107 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RNU6-12P-201ENST00000384604 107 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RNU6-41P-201ENST00000384741 107 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RNA5SP144-201ENST00000410846 116 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 SNORD123-201ENST00000459473 70 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RN7SL429P-201ENST00000479090 223 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RN7SL489P-201ENST00000486185 223 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RN7SL327P-201ENST00000488659 223 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 MIR3163-201ENST00000581592 73 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 RN7SL853P-201ENST00000617250 223 ntBASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
PTCHD1Q96NR3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.309-201ENST00000365046 111 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 RNU6-1014P-201ENST00000383940 103 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.495-201ENST00000384435 112 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 RN7SKP192-201ENST00000411291 327 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 RNU7-67P-201ENST00000459003 62 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 IGKV3-31-201ENST00000523109 329 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 MIR548AR-201ENST00000582191 57 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 AC067747.1-201ENST00000608026 250 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
PTCHD1Q96NR3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.163-201ENST00000363702 113 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNU6-457P-201ENST00000363999 107 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.323-201ENST00000365157 109 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 MIR548D2-201ENST00000384955 97 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNU4-53P-201ENST00000410828 140 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 AL022718.1-201ENST00000412004 84 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNU7-45P-201ENST00000459460 63 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNU7-53P-201ENST00000516705 60 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNU6-958P-201ENST00000516995 106 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 RNA5SP170-201ENST00000517150 101 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 FAM106DP-201ENST00000586416 501 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
PTCHD1Q96NR3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 MIR1302-5-201ENST00000408164 150 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 RNA5SP57-201ENST00000459463 123 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 AC055731.1-201ENST00000474387 401 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 RPL39P34-201ENST00000477141 156 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 RNU2-13P-201ENST00000515909 113 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 RNA5SP281-201ENST00000516504 135 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 RNU6-94P-201ENST00000607728 107 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 AL590808.1-201ENST00000618696 141 ntBASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PTCHD1Q96NR3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 Y_RNA.344-201ENST00000365381 112 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 SNORA24-201ENST00000384096 131 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 RNU6-1319P-201ENST00000390855 104 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 RNU6-747P-201ENST00000390928 104 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 RNU6-241P-201ENST00000391148 104 ntBASIC2.18□□□□□ -2.06
PTCHD1Q96NR3 RNU6-177P-201ENST00000411257 104 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms