Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
CHAMP1Q96JM3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
CHAMP1Q96JM3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 RNU6-834P-201ENST00000362367 110 ntBASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 RNU6-830P-201ENST00000516353 107 ntBASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 SNORD36C-201ENST00000516733 66 ntBASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 AC021506.2-201ENST00000612354 169 ntBASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
CHAMP1Q96JM3 RNU6-647P-201ENST00000364243 107 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 MTATP6P29-201ENST00000415057 132 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 AL445646.1-201ENST00000431784 216 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 MTATP6P21-201ENST00000440681 189 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 RNU6-781P-201ENST00000516377 101 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 RNU1-40P-201ENST00000516816 164 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 RNU1-97P-201ENST00000516872 164 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHAMP1Q96JM3 SNORD58C-201ENST00000365223 64 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 RNU6-42P-201ENST00000384165 107 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 AC015922.2-201ENST00000435593 184 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHAMP1Q96JM3 Y_RNA.81-201ENST00000362997 102 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 RN7SKP19-201ENST00000516016 252 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 SNORA4-201ENST00000584302 138 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 AC015726.2-201ENST00000620112 122 ntBASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHAMP1Q96JM3 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 RNU2-7P-201ENST00000410794 178 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 AC087499.4-201ENST00000448505 178 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 snoU13.27-201ENST00000459278 104 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 RNA5SP481-201ENST00000516814 122 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 RNA5SP364-201ENST00000516938 78 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 AP003484.1-201ENST00000530974 250 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
CHAMP1Q96JM3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 RNU6-1325P-201ENST00000364905 105 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 SNORA2.2-201ENST00000365473 135 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 SNORD38C-201ENST00000384381 69 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 RNU6-429P-201ENST00000384582 108 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 RPS26P48-201ENST00000491713 339 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 RNU7-12P-201ENST00000516030 62 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 RNU6-113P-201ENST00000516653 101 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 SNORA31.17-201ENST00000516953 127 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 AC133485.4-201ENST00000561835 220 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 AC138907.4-201ENST00000570107 226 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 AL359821.1-201ENST00000605519 182 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 MIR6734-201ENST00000621166 68 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 MIR219B-201ENST00000637023 88 ntBASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CHAMP1Q96JM3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 MIR583-201ENST00000384846 75 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 U8.13-201ENST00000390842 128 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 RNA5SP489-201ENST00000410986 109 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 AC003989.2-201ENST00000440224 169 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 AC093850.1-201ENST00000454121 251 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 MIR4709-201ENST00000577272 72 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 AC092881.1-201ENST00000638218 2733 ntBASIC2.26□□□□□ -2.05
CHAMP1Q96JM3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 RNU6-1144P-201ENST00000384247 104 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 SUMO2P12-201ENST00000405924 140 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 SNORD23.1-201ENST00000408212 104 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 RNU6-1064P-201ENST00000410626 104 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 RNU6-1061P-201ENST00000516530 99 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CHAMP1Q96JM3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 RNU6-349P-201ENST00000362402 107 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 RNU6-1056P-201ENST00000383996 107 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 RNU6-476P-201ENST00000384726 107 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 MIR660-201ENST00000385235 97 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 BTF3P4-201ENST00000418852 495 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 RNU7-34P-201ENST00000459394 64 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 SNORA31.4-201ENST00000516049 129 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 SNORD33.1-201ENST00000516213 88 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 RNU6-919P-201ENST00000516731 104 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 U6.95-201ENST00000636931 70 ntBASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.24□□□□□ -2.05
CHAMP1Q96JM3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.23□□□□□ -2.05
CHAMP1Q96JM3 MIR526A1-201ENST00000384897 85 ntBASIC2.23□□□□□ -2.05
CHAMP1Q96JM3 RNU6-360P-201ENST00000390944 104 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms